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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 1.21.1.1

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Mus musculus (5)
	Thermotoga neapolitana DSM 4359 (4)
	Haliscomenobacter hydrossis DSM 1100 (3)
	Homo sapiens (3)

Taxonomy

	Eukaryota (8)
	Bacteria (7)

Experimental Method

X-RAY DIFFRACTION (15)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (3)
	2.0 - 2.5 (8)
	2.5 - 3.0 (3)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (4)
	2015 - 2019 (4)
	2020 - 2024 (4)

Enzyme Classification Name

Oxidoreductases (15)

Symmetry Type

Cyclic (15)

SCOP Classification

Alpha and beta proteins (a+b) (4)

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1 to 15 of 15 Structures

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Explore in 3D

3GB5 \| pdb_00003gb5	Download File View File

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN

Thomas, S.R., McTamney, P.M., Adler, J.M., LaRonde-LeBlanc, N., Rokita, S.E.

(2009) J Biological Chem 284: 19659-19667

Released	2009-05-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	Iodotyrosine dehalogenase 1 (protein)
Unique Ligands	ACT, FMN, PO4

Explore in 3D

3GFD \| pdb_00003gfd	Download File View File

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN and mono-iodotyrosine (MIT)

Thomas, S.R., McTamney, P.M., Adler, J.M., LaRonde-LeBlanc, N., Rokita, S.E.

(2009) J Biological Chem 284: 19659-19667

Released	2009-05-12
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Mus musculus
Macromolecule	Iodotyrosine dehalogenase 1 (protein)
Unique Ligands	FMN, GOL, IYR

Explore in 3D

3GH8 \| pdb_00003gh8	Download File View File

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN and di-iodotyrosine (DIT)

Thomas, S.R., McTamney, P.M., Adler, J.M., LaRonde-LeBlanc, N., Rokita, S.E.

(2009) J Biological Chem 284: 19659-19667

Released	2009-05-12
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Mus musculus
Macromolecule	Iodotyrosine dehalogenase 1 (protein)
Unique Ligands	FMN, PO4, TYI

Explore in 3D

3TNZ \| pdb_00003tnz	Download File View File

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) C217A, C239A bound to FMN and mono-iodotyrosine (MIT)

Buss, J.M., McTamney, P.M., Rokita, S.E.

(2012) Protein Sci 21: 351-361

Released	2012-02-29
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mus musculus
Macromolecule	Iodotyrosine dehalogenase 1 (protein)
Unique Ligands	FLC, FMN, GOL, IYR

Explore in 3D

3TO0 \| pdb_00003to0	Download File View File

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) C217A, C239A bound to FMN

Buss, J.M., McTamney, P.M., Rokita, S.E.

(2012) Protein Sci 21: 351-361

Released	2012-02-29
Method	X-RAY DIFFRACTION 2.655 Å
Organisms	Mus musculus
Macromolecule	Iodotyrosine deiodinase 1 (protein)
Unique Ligands	ACT, FMN, PO4

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4TTB \| pdb_00004ttb	Download File View File

Crystal structure of homo sapiens IODOTYROSINE DEIODINASE (IYD) bound to FMN

Chuenchor, W., Hu, J., Rokita, S.

(2015) J Biological Chem 290: 590-600

Released	2014-11-26
Method	X-RAY DIFFRACTION 2.447 Å
Organisms	Homo sapiens
Macromolecule	Iodotyrosine dehalogenase 1 (protein)
Unique Ligands	FMN

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4TTC \| pdb_00004ttc	Download File View File

Crystal structure of homo sapiens IODOTYROSINE DEIODINASE bound to FMN and mono-iodotyrosine (MIT)

Chuenchor, W., Hu, J., Rokita, S.

(2015) J Biological Chem 290: 590-600

Released	2014-11-26
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Iodotyrosine dehalogenase 1 (protein)
Unique Ligands	FMN, IYR

Explore in 3D

5KO7 \| pdb_00005ko7	Download File View File

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN

Ingavat, N., Kavran, J.M., Sun, Z., Rokita, S.

(2017) Biochemistry 56: 1130-1139

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.248 Å
Organisms	Haliscomenobacter hydrossis DSM 1100
Macromolecule	Nitroreductase (protein)
Unique Ligands	FMN

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5KO8 \| pdb_00005ko8	Download File View File

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and mono-iodotyrosine (I-Tyr)

Ingavat, N., Kavran, J.M., Sun, Z., Rokita, S.E.

(2017) Biochemistry 56: 1130-1139

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Haliscomenobacter hydrossis DSM 1100
Macromolecule	Nitroreductase (protein)
Unique Ligands	FMN, IYR

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5KRD \| pdb_00005krd	Download File View File

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and 2-iodophenol (2IP)

Ingavat, N., Kavran, J.M., Sun, Z., Rokita, S.

(2017) Biochemistry 56: 1130-1139

Released	2017-02-15
Method	X-RAY DIFFRACTION 2.103 Å
Organisms	Haliscomenobacter hydrossis DSM 1100
Macromolecule	Nitroreductase (protein)
Unique Ligands	6X8, FMN

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5YAK \| pdb_00005yak	Download File View File

The crystal structure of human IYD Thr239 mutant with ligand 3-Fluorotyrosine (F-Tyr)

Hu, J.M., Rokita, S.E., Schlessman, J.

(2019) Protein Sci 28: 68-78

Released	2018-08-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Iodotyrosine deiodinase 1 (protein)
Unique Ligands	FMN, YOF

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6PZ0 \| pdb_00006pz0	Download File View File

Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and L-Tyrosine

Sun, Z., Kavran, J.M., Rokita, S.E.

(2021) J Biological Chem 297: 101385-101385

Released	2021-02-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Thermotoga neapolitana DSM 4359
Macromolecule	iodotyrosine deiodinase (protein)
Unique Ligands	CL, FMN, TYR

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6Q1B \| pdb_00006q1b	Download File View File

Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and 3-fluoro-L-tyrosine

Sun, Z., Kavran, J.M., Rokita, S.E.

To be published

Released	2021-02-03
Method	X-RAY DIFFRACTION 1.596 Å
Organisms	Thermotoga neapolitana DSM 4359
Macromolecule	iodotyrosine deiodinase (protein)
Unique Ligands	CL, FMN, YOF

Explore in 3D

6Q1L \| pdb_00006q1l	Download File View File

Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and 3-iodo-L-tyrosine

Sun, Z., Kavran, J.M., Rokita, S.E.

(2021) J Biological Chem 297: 101385-101385

Released	2021-04-07
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermotoga neapolitana DSM 4359
Macromolecule	iodotyrosine deiodinase (protein)
Unique Ligands	CL, FMN, IYR

Explore in 3D

6TYK \| pdb_00006tyk	Download File View File

Crystal structure of iodotyrosine deiodinase (IYD) in the semiquinone form bound to FMN and 3-iodo-L-tyrosine

Sun, Z., Kavran, J.M., Rokita, S.E.

To be published

Released	2021-04-07
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Thermotoga neapolitana DSM 4359
Macromolecule	iodotyrosine deiodinase (protein)
Unique Ligands	CL, FMN, IYR

1 to 15 of 15 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3GB5 | pdb_00003gb5

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN

3GFD | pdb_00003gfd

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN and mono-iodotyrosine (MIT)

3GH8 | pdb_00003gh8

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN and di-iodotyrosine (DIT)

3TNZ | pdb_00003tnz

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) C217A, C239A bound to FMN and mono-iodotyrosine (MIT)

3TO0 | pdb_00003to0

Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) C217A, C239A bound to FMN

4TTB | pdb_00004ttb

Crystal structure of homo sapiens IODOTYROSINE DEIODINASE (IYD) bound to FMN

4TTC | pdb_00004ttc

Crystal structure of homo sapiens IODOTYROSINE DEIODINASE bound to FMN and mono-iodotyrosine (MIT)

5KO7 | pdb_00005ko7

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN

5KO8 | pdb_00005ko8

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and mono-iodotyrosine (I-Tyr)

5KRD | pdb_00005krd

Crystal structure of haliscomenobacter hydrossis iodotyrosine deiodinase (IYD) bound to FMN and 2-iodophenol (2IP)

5YAK | pdb_00005yak

The crystal structure of human IYD Thr239 mutant with ligand 3-Fluorotyrosine (F-Tyr)

6PZ0 | pdb_00006pz0

Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and L-Tyrosine

6Q1B | pdb_00006q1b

Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and 3-fluoro-L-tyrosine

6Q1L | pdb_00006q1l

Crystal structure of oxidized iodotyrosine deiodinase (IYD) bound to FMN and 3-iodo-L-tyrosine

6TYK | pdb_00006tyk

Crystal structure of iodotyrosine deiodinase (IYD) in the semiquinone form bound to FMN and 3-iodo-L-tyrosine

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3GB5 | pdb_00003gb5

3GFD | pdb_00003gfd

3GH8 | pdb_00003gh8

3TNZ | pdb_00003tnz

3TO0 | pdb_00003to0

4TTB | pdb_00004ttb

4TTC | pdb_00004ttc

5KO7 | pdb_00005ko7

5KO8 | pdb_00005ko8

5KRD | pdb_00005krd

5YAK | pdb_00005yak

6PZ0 | pdb_00006pz0

6Q1B | pdb_00006q1b

6Q1L | pdb_00006q1l

6TYK | pdb_00006tyk