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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Faendrich, M."

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Search Summary

This query matches 25 Structures.

Refinements

Structure Determination Methodology

experimental (25)

Scientific Name of Source Organism

	Homo sapiens (18)
	Mus musculus (5)
	Camelidae (1)
	HIV whole-genome vector AA1305#18 (1)

Taxonomy

	Eukaryota (24)
	other sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (23)
	X-RAY DIFFRACTION (2)

Polymer Entity Type

Protein (25)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (1)
	2.0 - 2.5 (3)
	2.5 - 3.0 (12)
	3.0 - 3.5 (3)
	3.5 - 4.0 (4)
	4.0 - 4.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (3)
	2020 - 2024 (21)

Enzyme Classification Name

Hydrolases (1)

Symmetry Type

	Asymmetric (11)
	Cyclic (9)
	Helical (5)

SCOP Classification

All beta proteins (2)

AllSelected

1 to 25 of 25 Structures

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3LN9 \| pdb_00003ln9	Download File View File

Crystal structure of the fibril-specific B10 antibody fragment

Parthier, C., Morgado, I., Stubbs, M.T., Faendrich, M.

(2010) J Mol Biology

Released	2010-12-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Camelidae
Macromolecule	Immunoglobulin heavy chain antibody variable domain B10 (protein)
Unique Ligands	FLC, GOL, SO4

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5L6Q \| pdb_00005l6q	Download File View File

Refolded AL protein from cardiac amyloidosis

Annamalai, K., Liberta, F., Vielberg, M.-T., Lilie, H., Guehrs, K.-H., Schierhorn, A., Koehler, R., Schmidt, A., Haupt, C., Hegenbart, O., Schoenland, S., Groll, M., Faendrich, M.

(2017) Angew Chem Int Ed Engl 56: 7510-7514

Released	2017-05-31
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	H5AL (protein)
Unique Ligands	CL, CO3, NA, PEG, PGE, ZN

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6IC3 \| pdb_00006ic3	Download File View File

AL amyloid fibril from a lambda 1 light chain

Fritz, G., Faendrich, M., Schmidt, M., Radamaker, L.

(2019) Nat Commun 10: 1103-1103

Released	2019-04-03
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Homo sapiens
Macromolecule	lambda 1 light chain fragment, residues 3-118 (protein)

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6SDZ \| pdb_00006sdz	Download File View File

transthyritin derived amyloid fibril from patient with hereditary V30M ATTR amyloidosis

Fritz, G., Agarwal, S., Faendrich, M.

(2019) Nat Commun 10: 5008-5008

Released	2019-11-13
Method	ELECTRON MICROSCOPY 2.97 Å
Organisms	Homo sapiens
Macromolecule	Transthyretin (protein)

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6ZCF \| pdb_00006zcf	Download File View File

Amyloid fibril morphology i (in vitro) from murine SAA1.1 protein

Bansal, A., Schmidt, M., Faendrich, M.

(2021) Nat Commun 12: 1013-1013

Released	2021-02-17
Method	ELECTRON MICROSCOPY 2.73 Å
Organisms	Mus musculus
Macromolecule	Serum amyloid A-2 protein (protein)

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6ZCH \| pdb_00006zch	Download File View File

Amyloid fibril morphology II (ex vivo) from murine SAA1.1 protein.

Bansal, A., Schmidt, M., Faendrich, M.

(2021) Nat Commun 12: 1013-1013

Released	2021-02-17
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Mus musculus
Macromolecule	Serum amyloid A-2 protein (protein)

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7OVT \| pdb_00007ovt	Download File View File

major seeded in vitro fibril morphology from murine SAA1.1 protein

Heerde, T., Schmidt, M., Faendrich, M.

(2022) Nat Commun 13: 85-85

Released	2022-02-02
Method	ELECTRON MICROSCOPY 2.69 Å
Organisms	Mus musculus
Macromolecule	Serum amyloid A-2 protein (protein)

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7ZJ2 \| pdb_00007zj2	Download File View File

Amyloid fibril (in vitro) from full-length hnRNPA1 protein

Sharma, K., Banerjee, S., Schmidt, M., Faendrich, M.

(2023) J Mol Biology 435: 168211-168211

Released	2023-08-02
Method	ELECTRON MICROSCOPY 3.32 Å
Organisms	Homo sapiens
Macromolecule	Isoform A1-A of Heterogeneous nuclear ribonucleoprotein A1 (protein)

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7ZKY \| pdb_00007zky	Download File View File

Amyloid fibril from human systemic AA amyloidosis (vascular variant)

Banerjee, S., Schmidt, M., Faendrich, M.

(2022) Nat Commun 13: 7261-7261

Released	2022-12-07
Method	ELECTRON MICROSCOPY 2.56 Å
Organisms	Homo sapiens
Macromolecule	Amyloid protein A (protein)

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8B3A \| pdb_00008b3a	Download File View File

catalytic amyloid fibril formed by Ac-LHLHLRL-amide

Heerde, T., Schmidt, M., Faendrich, M.

(2023) Sci Rep 13: 4070-4070

Released	2023-04-05
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Homo sapiens
Macromolecule	ACE-LEU-HIS-LEU-HIS-LEU-ARG-LEU-NH2 (protein)

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8OKR \| pdb_00008okr	Download File View File

virus enhancing amyloid fibril formed by CKFKFQF

Heerde, T., Schmidt, M., Faendrich, M.

(2023) Nat Commun 14: 4293-4293

Released	2023-08-02
Method	ELECTRON MICROSCOPY 2.86 Å
Organisms	HIV whole-genome vector AA1305#18
Macromolecule	PNF-18 (protein)

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8OQ4 \| pdb_00008oq4	Download File View File

AApoAII amyloid fibril Morphology II (ex vivo)

Andreotti, G., Schmidt, M., Faendrich, M.

(2024) J Mol Biology 436: 168441-168441

Released	2024-02-21
Method	ELECTRON MICROSCOPY 2.6 Å
Organisms	Mus musculus
Macromolecule	Apolipoprotein A-II (protein)

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8OQ5 \| pdb_00008oq5	Download File View File

AApoAII amyloid fibril Morphology I (ex vivo)

Andreotti, G., Schmidt, M., Faendrich, M.

(2024) J Mol Biology 436: 168441-168441

Released	2024-02-21
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Mus musculus
Macromolecule	Apolipoprotein A-II (protein)

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8OT1 \| pdb_00008ot1	Download File View File

unseeded Abeta(1-40) amyloid fibril (morphology i)

Pfeiffer, P.B., Schmidt, M., Faendrich, M.

(2023) J Mol Biology 436: 168422-168422

Released	2024-02-07
Method	ELECTRON MICROSCOPY 2.59 Å
Organisms	Homo sapiens
Macromolecule	Amyloid-beta A4 protein (protein)

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8OT3 \| pdb_00008ot3	Download File View File

unseeded Abeta(1-40) amyloid fibril (morphology ii)

Pfeiffer, P.B., Schmidt, M., Faendrich, M.

(2023) J Mol Biology 436: 168422-168422

Released	2024-02-07
Method	ELECTRON MICROSCOPY 2.73 Å
Organisms	Homo sapiens
Macromolecule	Amyloid-beta A4 protein (protein)

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8OT4 \| pdb_00008ot4	Download File View File

seeded Abeta(1-40) amyloid fibril (morphology I)

Pfeiffer, P.B., Schmidt, M., Faendrich, M.

(2023) J Mol Biology 436: 168422-168422

Released	2024-02-07
Method	ELECTRON MICROSCOPY 2.97 Å
Organisms	Homo sapiens
Macromolecule	Amyloid-beta A4 protein (protein)

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8PKE \| pdb_00008pke	Download File View File

ATTRV20I amyloid fibril from hereditary ATTR amloidosis

Steinebrei, M., Schmidt, M., Faendrich, M.

(2023) Nat Commun 14: 7623-7623

Released	2023-12-06
Method	ELECTRON MICROSCOPY 3.39 Å
Organisms	Homo sapiens
Macromolecule	Transthyretin (protein)

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8PKF \| pdb_00008pkf	Download File View File

ATTRG47E amyloid fibril from hereditary ATTR amloidosis

Steinebrei, M., Schmidt, M., Faendrich, M.

(2023) Nat Commun 14: 7623-7623

Released	2023-12-06
Method	ELECTRON MICROSCOPY 2.3673 Å
Organisms	Homo sapiens
Macromolecule	Transthyretin (protein)

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8PKG \| pdb_00008pkg	Download File View File

ATTRV122I amyloid fibril from hereditary ATTR amloidosis

Steinebrei, M., Schmidt, M., Faendrich, M.

(2023) Nat Commun 14: 7623-7623

Released	2023-12-06
Method	ELECTRON MICROSCOPY 2.99 Å
Organisms	Homo sapiens
Macromolecule	Transthyretin (protein)

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8QX9 \| pdb_00008qx9	Download File View File

TDP-43 amyloid fibrils: Morphology-1a

Sharma, K., Shenoy, J., Loquet, A., Schmidt, M., Faendrich, M.

(2024) Nat Commun 15: 486-486

Released	2024-01-24
Method	ELECTRON MICROSCOPY 3.76 Å
Organisms	Homo sapiens
Macromolecule	TAR DNA-binding protein 43 (protein)

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8QXA \| pdb_00008qxa	Download File View File

TDP-43 amyloid fibrils: Morphology-1b

Sharma, K., Shenoy, J., Loquet, A., Schmidt, M., Faendrich, M.

(2024) Nat Commun 15: 486-486

Released	2024-01-24
Method	ELECTRON MICROSCOPY 4.05 Å
Organisms	Homo sapiens
Macromolecule	TAR DNA-binding protein 43 (protein)

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8QXB \| pdb_00008qxb	Download File View File

TDP-43 amyloid fibrils: Morphology-2

Sharma, K., Shenoy, J., Loquet, A., Schmidt, M., Faendrich, M.

(2024) Nat Commun 15: 486-486

Released	2024-01-24
Method	ELECTRON MICROSCOPY 3.86 Å
Organisms	Homo sapiens
Macromolecule	TAR DNA-binding protein 43 (protein)

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8R47 \| pdb_00008r47	Download File View File

AL amyloid fibril from the FOR010 light chain

Pfeiffer, P.B., Banerjee, S., Schmidt, M., Faendrich, M.

(2024) Nat Commun 15: 5121-5121

Released	2024-06-26
Method	ELECTRON MICROSCOPY 2.25 Å
Organisms	Homo sapiens
Macromolecule	lambda 3 immunoglobulin light chain fragment, residues 4-116 (protein)

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8R4A \| pdb_00008r4a	Download File View File

Cryo-EM structure of the D87G lysozyme amyloid fibril

Karimi-Farsijani, S., Sharma, K., Schmidt, M., Faendrich, M.

(2024) Nat Commun 15: 9648-9648

Released	2024-11-20
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Homo sapiens
Macromolecule	Lysozyme C (protein)

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9EME \| pdb_00009eme	Download File View File

AL amyloid fibril from the FOR103 light chain

Pfeiffer, P.B., Karimi-Farsijani, S., Kupfer, N., Schmidt, M., Faendrich, M.

(2024) Nat Commun 15: 5121-5121

Released	2024-06-26
Method	ELECTRON MICROSCOPY 2.92 Å
Organisms	Homo sapiens
Macromolecule	lambda 3 immunoglobulin light chain fragment, residues 2-116 (protein)

1 to 25 of 25 Structures

Page 1 of 1

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3LN9 | pdb_00003ln9

5L6Q | pdb_00005l6q

6IC3 | pdb_00006ic3

6SDZ | pdb_00006sdz

6ZCF | pdb_00006zcf

6ZCH | pdb_00006zch

7OVT | pdb_00007ovt

7ZJ2 | pdb_00007zj2

7ZKY | pdb_00007zky

8B3A | pdb_00008b3a

8OKR | pdb_00008okr

8OQ4 | pdb_00008oq4

8OQ5 | pdb_00008oq5

8OT1 | pdb_00008ot1

8OT3 | pdb_00008ot3

8OT4 | pdb_00008ot4

8PKE | pdb_00008pke

8PKF | pdb_00008pkf

8PKG | pdb_00008pkg

8QX9 | pdb_00008qx9

8QXA | pdb_00008qxa

8QXB | pdb_00008qxb

8R47 | pdb_00008r47

8R4A | pdb_00008r4a

9EME | pdb_00009eme