7TYW

Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

A structural basis for amylin receptor phenotype.

Cao, J.Belousoff, M.J.Liang, Y.L.Johnson, R.M.Josephs, T.M.Fletcher, M.M.Christopoulos, A.Hay, D.L.Danev, R.Wootten, D.Sexton, P.M.

(2022) Science 375: eabm9609-eabm9609

  • DOI: https://doi.org/10.1126/science.abm9609
  • Primary Citation of Related Structures:  
    7TYF, 7TYH, 7TYI, 7TYL, 7TYN, 7TYO, 7TYW, 7TYX, 7TYY, 7TZF

  • PubMed Abstract: 

    Amylin receptors (AMYRs) are heterodimers of the calcitonin (CT) receptor (CTR) and one of three receptor activity-modifying proteins (RAMPs), AMY 1 R, AMY 2 R, and AMY 3 R. Selective AMYR agonists and dual AMYR/CTR agonists are being developed as obesity treatments; however, the molecular basis for peptide binding and selectivity is unknown. We determined the structure and dynamics of active AMYRs with amylin, AMY 1 R with salmon CT (sCT), AMY 2 R with sCT or human CT (hCT), and CTR with amylin, sCT, or hCT. The conformation of amylin-bound complexes was similar for all AMYRs, constrained by the RAMP, and an ordered midpeptide motif that we call the bypass motif. The CT-bound AMYR complexes were distinct, overlapping the CT-bound CTR complexes. Our findings indicate that activation of AMYRs by CT-based peptides is distinct from their activation by amylin-based peptides. This has important implications for the development of AMYR therapeutics.


  • Organizational Affiliation

    Drug Discovery Biology Theme, Monash Institute of Pharmaceutical Sciences, Monash University, Parkville 3052, Victoria, Australia.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Receptor activity-modifying protein 1A [auth E]149Homo sapiensMutation(s): 0 
Gene Names: RAMP1
Membrane Entity: Yes 
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PHAROS:  O60894
GTEx:  ENSG00000132329 
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UniProt GroupO60894
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Calcitonin-1B [auth P]33Salmo salarMutation(s): 1 
Membrane Entity: Yes 
UniProt
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UniProt GroupB5XGR7
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Calcitonin receptorC [auth R]501Homo sapiensMutation(s): 0 
Gene Names: CALCR
Membrane Entity: Yes 
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GTEx:  ENSG00000004948 
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UniProt GroupP30988
Glycosylation
Glycosylation Sites: 2Go to GlyGen: P30988-2
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(s) subunit alpha isoforms shortD [auth A]394Homo sapiensMutation(s): 1 
Gene Names: GNASGNAS1GSP
EC: 3.6.5
Membrane Entity: Yes 
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GTEx:  ENSG00000087460 
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UniProt GroupP63092
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1E [auth B]350Homo sapiensMutation(s): 0 
Gene Names: GNB1
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PHAROS:  P62873
GTEx:  ENSG00000078369 
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UniProt GroupP62873
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2F [auth G]71Homo sapiensMutation(s): 0 
Gene Names: GNG2
Membrane Entity: Yes 
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GTEx:  ENSG00000186469 
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UniProt GroupP59768
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
nanobody 35G [auth N]138Lama glamaMutation(s): 0 
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Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Australian Research Council (ARC)AustraliaIC200100052
National Health and Medical Research Council (NHMRC, Australia)Australia1120919
National Health and Medical Research Council (NHMRC, Australia)Australia1159006
National Health and Medical Research Council (NHMRC, Australia)Australia1150083
National Health and Medical Research Council (NHMRC, Australia)Australia1154434
National Health and Medical Research Council (NHMRC, Australia)Australia1155302
Japan Science and TechnologyJapan18069571

Revision History  (Full details and data files)

  • Version 1.0: 2022-03-23
    Type: Initial release
  • Version 1.1: 2022-04-06
    Changes: Database references
  • Version 1.2: 2024-11-13
    Changes: Data collection, Structure summary