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235,183 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Calloselasma rhodostoma"

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Search Summary

This query matches 37 Structures.

Refinements

Structure Determination Methodology

experimental (37)

Scientific Name of Source Organism

	Calloselasma rhodostoma (37)
	Homo sapiens (12)

Taxonomy

	Eukaryota (36)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (27)
	SOLUTION NMR (10)

Polymer Entity Type

Protein (37)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (3)
	1.5 - 2.0 (7)
	2.0 - 2.5 (3)
	2.5 - 3.0 (4)
	3.0 - 3.5 (8)
	3.5 - 4.0 (1)

Release Date

	2000 - 2004 (5)
	2005 - 2009 (8)
	2010 - 2014 (7)
	2015 - 2019 (14)
	2020 - 2024 (3)

Enzyme Classification Name

	Hydrolases (9)
	Oxidoreductases (3)

Symmetry Type

	Asymmetric (30)
	Cyclic (7)

SCOP Classification

	Alpha and beta proteins (a+b) (15)
	Alpha and beta proteins (a/b) (11)
	Small proteins (15)
	Artifacts (1)

AllSelected

1 to 25 of 37 Structures

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1F8R \| pdb_00001f8r	Download File View File

CRYSTAL STRUCTURE OF L-AMINO ACID OXIDASE FROM CALLOSELASMA RHODOSTOMA COMPLEXED WITH CITRATE

Pawelek, P.D., Cheah, J., Coulombe, R., Macheroux, P., Ghisla, S., Vrielink, A.

(2000) EMBO J 19: 4204-4215

Released	2000-08-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Calloselasma rhodostoma
Macromolecule	L-AMINO ACID OXIDASE (protein)
Unique Ligands	CIT, FAD, NAG
Unique branched monosaccharides	FUC, NAG

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1F8S \| pdb_00001f8s	Download File View File

CRYSTAL STRUCTURE OF L-AMINO ACID OXIDASE FROM CALLOSELASMA RHODOSTOMA, COMPLEXED WITH THREE MOLECULES OF O-AMINOBENZOATE.

Pawelek, P.D., Cheah, J., Coulombe, R., Macheroux, P., Ghisla, S., Vrielink, A.

(2000) EMBO J 19: 4204-4215

Released	2000-08-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Calloselasma rhodostoma
Macromolecule	L-AMINO ACID OXIDASE (protein)
Unique Ligands	BE2, FAD, NAG

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1N4Y \| pdb_00001n4y	Download File View File

REFINED STRUCTURE OF KISTRIN

Krezel, A.M., Krane, J., Dennis, M.S., Lazarus, R.A., Wagner, G.

(1991) Science 253: 445-448

Released	2003-01-28
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	KISTRIN (protein)

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1Q7I \| pdb_00001q7i	Download File View File

Structural Analysis of Integrin alpha IIb beta 3- Disintegrin with the AKGDWN Motif

Chuang, W.J., Chen, C.Y., Shiu, J.H., Chen, Y.C.

To be published

Released	2004-09-21
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Hemorrhagic protein-rhodostomin (protein)

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1Q7J \| pdb_00001q7j	Download File View File

Structural Analysis of Integrin alpha IIb beta 3- Disintegrin with the AKGDWN Motif

Chuang, W.J., Chen, C.Y., Shiu, J.H., Chen, Y.C.

To be published

Released	2004-09-21
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Hemorrhagic protein-rhodostomin (protein)

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1SB2 \| pdb_00001sb2	Download File View File

High resolution Structure determination of rhodocetin

Paaventhan, P., Kong, C.G., Joseph, J.S., Chung, M.C.M., Kolatkar, P.R.

(2005) Protein Sci 14: 169-175

Released	2005-02-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Rhodocetin alpha subunit (protein) Rhodocetin beta subunit (protein)

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2IID \| pdb_00002iid	Download File View File

Structure of L-amino acid oxidase from Calloselasma rhodostoma in complex with L-phenylalanine

Moustafa, I.M., Foster, S., Lyubimov, A.Y., Vrielink, A.

(2006) J Mol Biology 364: 991-1002

Released	2006-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Calloselasma rhodostoma
Macromolecule	L-amino-acid oxidase (protein)
Unique Ligands	FAD, NAG, PHE
Unique branched monosaccharides	FUC, NAG

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2LJV \| pdb_00002ljv	Download File View File

Solution structure of Rhodostomin G50L mutant

Chuang, W., Shiu, J., Chen, C., Chen, Y., Chang, Y., Huang, C.

To be published

Released	2012-10-03
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Disintegrin rhodostomin (protein)

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2M75 \| pdb_00002m75	Download File View File

The C-terminal Region of Disintegrin Modulate its 3D Conformation and Cooperate with RGD Loop in Regulating Recognitions of Integrins

Chuang, W., Chang, Y., Shiu, J.

To be published

Released	2013-05-22
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Zinc metalloproteinase/disintegrin (protein)

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2M7F \| pdb_00002m7f	Download File View File

The C-terminal Region of Disintegrin Modulate its 3D Conformation and Cooperate with RGD Loop in Regulating Integrins Recognitions

Chuang, W., Chang, Y.

To be published

Released	2013-05-22
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Zinc metalloproteinase/disintegrin (protein)

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2M7H \| pdb_00002m7h	Download File View File

The C-terminal Region of Disintegrin Modulate its 3D Conformation and Cooperate with RGD Loop in Regulating Integrin alpha-IIb beta-3 Recognition

Chuang, W., Chang, Y.

To be published

Released	2013-05-22
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Zinc metalloproteinase/disintegrin (protein)

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2PJF \| pdb_00002pjf	Download File View File

Solution structure of rhodostomin

Chuang, W.J., Chen, Y.C., Chen, C.Y., Chang, Y.T.

(2009) Proteins

Released	2007-05-08
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Rhodostoxin-disintegrin rhodostomin (protein)

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2PJG \| pdb_00002pjg	Download File View File

Solution structure of rhodostomin D51E mutant

Chuang, W.J., Chen, Y.C., Chen, C.Y., Chou, L.J.

(2009) Proteins

Released	2007-05-08
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Rhodostoxin-disintegrin rhodostomin (protein)

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2PJI \| pdb_00002pji	Download File View File

Solution structure of rhodostomin P48A mutant

Chuang, W.-J., Liu, Y.-C., Shiu, J.-H.

To be published

Released	2007-05-08
Method	SOLUTION NMR
Organisms	Calloselasma rhodostoma
Macromolecule	Rhodostoxin-disintegrin rhodostomin (protein)

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2VRP \| pdb_00002vrp	Download File View File

Structure of rhodocytin

Watson, A.A., O'Callaghan, C.A.

(2008) Protein Sci 17: 1611

Released	2008-07-08
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Calloselasma rhodostoma
Macromolecule	AGGRETIN ALPHA CHAIN (protein) AGGRETIN BETA CHAIN (protein)
Unique Ligands	CL, NA

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3BX4 \| pdb_00003bx4	Download File View File

Crystal structure of the snake venom toxin aggretin

Hooley, E., Papagrigoriou, E., Navdaev, A., Pandey, A., Clemetson, J.M., Clemetson, K.J., Emsley, J.

(2008) Biochemistry 47: 7831-7837

Released	2008-08-26
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Aggretin alpha chain (protein) Aggretin beta chain (protein)
Unique Ligands	GOL, SO4

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3GPR \| pdb_00003gpr	Download File View File

Crystal structure of rhodocetin

Stetefeld, J.

(2009) FASEB J 23: 2917-2927

Released	2009-12-15
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Rhodocetin subunit alpha (protein) Rhodocetin subunit beta (protein) Rhodocetin subunit delta (protein) Rhodocetin subunit gamma (protein)

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3UCI \| pdb_00003uci	Download File View File

Crystal structure of Rhodostomin ARLDDL mutant

Shiu, J.H., Chen, C.Y., Chen, Y.C., Chang, Y.T., Chang, Y.S., Huang, C.H., Chuang, W.J.

To be published

Released	2012-11-21
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Calloselasma rhodostoma
Macromolecule	disintegrin (protein)

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3WWK \| pdb_00003wwk	Download File View File

Crystal structure of CLEC-2 in complex with rhodocytin

Nagae, M., Morita-Matsumoto, K., Kato, M., Kato-Kaneko, M., Kato, Y., Yamaguchi, Y.

(2014) Structure 22: 1711-1721

Released	2014-10-22
Method	X-RAY DIFFRACTION 2.98 Å
Organisms	Calloselasma rhodostoma Homo sapiens
Macromolecule	C-type lectin domain family 1 member B (protein) Snaclec rhodocytin subunit alpha (protein) Snaclec rhodocytin subunit beta (protein)

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4M4C \| pdb_00004m4c	Download File View File

Crystal structure of Rhodostomin ARGDP mutant

Chang, Y.T., Jeng, W.Y., Shiu, J.H., Chen, C.Y., Chuang, W.J.

To be published

Released	2014-08-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Zinc metalloproteinase/disintegrin (protein)
Unique Ligands	SO4

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4R5R \| pdb_00004r5r	Download File View File

Crystal structure of Rhodostomin KKKRT mutant

Huang, C.H., Shiu, J.H., Chang, Y.T., Jeng, W.Y., Chuang, W.J.

To be published

Released	2015-08-26
Method	X-RAY DIFFRACTION 0.96 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Disintegrin rhodostomin (protein)

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4R5U \| pdb_00004r5u	Download File View File

Crystal structure of Rhodostomin R46E mutant

Huang, C.H., Shiu, J.H., Chang, Y.T., Jeng, W.Y., Chuang, W.J.

To be published

Released	2015-08-26
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Disintegrin rhodostomin (protein)

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4RQG \| pdb_00004rqg	Download File View File

Crystal structure of Rhodostomin

Shiu, J.H., Huang, C.H., Chang, Y.T., Jeng, W.Y., Chuang, W.J.

To be published

Released	2015-11-04
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Calloselasma rhodostoma
Macromolecule	Disintegrin rhodostomin (protein)

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5THP \| pdb_00005thp	Download File View File

Rhodocetin in complex with the integrin alpha2-A domain

McDougall, M., Orriss, G.L., Stetefeld, J.

(2017) PLoS Biol 15: e2001492-e2001492

Released	2017-08-02
Method	X-RAY DIFFRACTION 3.006 Å
Organisms	Calloselasma rhodostoma Homo sapiens
Macromolecule	Integrin alpha-2 (protein) Snaclec rhodocetin subunit delta (protein) Snaclec rhodocetin subunit gamma (protein)
Unique Ligands	CL, GOL, MG, NA, SO4

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6ND8 \| pdb_00006nd8	Download File View File

RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND BARIUM

Stetefeld, J., McDougall, M.D., Loewen, P.C.

To be published

Released	2018-12-26
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Calloselasma rhodostoma Homo sapiens
Macromolecule	Integrin alpha-2 (protein) Snaclec rhodocetin subunit delta (protein) Snaclec rhodocetin subunit gamma (protein)
Unique Ligands	BA, CL, NA, NH4, SO4

1 to 25 of 37 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1F8R | pdb_00001f8r

1F8S | pdb_00001f8s

1N4Y | pdb_00001n4y

1Q7I | pdb_00001q7i

1Q7J | pdb_00001q7j

1SB2 | pdb_00001sb2

2IID | pdb_00002iid

2LJV | pdb_00002ljv

2M75 | pdb_00002m75

2M7F | pdb_00002m7f

2M7H | pdb_00002m7h

2PJF | pdb_00002pjf

2PJG | pdb_00002pjg

2PJI | pdb_00002pji

2VRP | pdb_00002vrp

3BX4 | pdb_00003bx4

3GPR | pdb_00003gpr

3UCI | pdb_00003uci

3WWK | pdb_00003wwk

4M4C | pdb_00004m4c

4R5R | pdb_00004r5r

4R5U | pdb_00004r5u

4RQG | pdb_00004rqg

5THP | pdb_00005thp

6ND8 | pdb_00006nd8