NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5W08 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5W08_NAG_F_404 | 26% | 67% | 0.122 | 0.79 | 0.35 | 0.74 | - | - | 0 | 0 | 100% | 1 |
| 5W08_NAG_B_408 | 12% | 24% | 0.138 | 0.714 | 1.22 | 1.86 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5W08_NAG_C_406 | 11% | 73% | 0.15 | 0.724 | 0.33 | 0.58 | - | - | 2 | 0 | 100% | 1 |
| 5W08_NAG_F_406 | 9% | 69% | 0.153 | 0.698 | 0.35 | 0.68 | - | - | 2 | 0 | 100% | 1 |
| 5W08_NAG_E_406 | 7% | 67% | 0.152 | 0.673 | 0.28 | 0.78 | - | 1 | 4 | 0 | 100% | 1 |
| 5W08_NAG_E_404 | 6% | 68% | 0.168 | 0.685 | 0.63 | 0.44 | 1 | - | 0 | 0 | 100% | 1 |
| 5W08_NAG_D_407 | 3% | 63% | 0.162 | 0.584 | 0.36 | 0.85 | - | - | 0 | 0 | 100% | 1 |
| 5W08_NAG_A_406 | 2% | 76% | 0.156 | 0.554 | 0.28 | 0.57 | - | - | 11 | 0 | 93% | 1 |
| 5W08_NAG_C_405 | 2% | 60% | 0.175 | 0.559 | 0.71 | 0.66 | 1 | - | 0 | 0 | 100% | 1 |
| 5W08_NAG_A_407 | 2% | 72% | 0.179 | 0.552 | 0.32 | 0.62 | - | - | 4 | 0 | 100% | 1 |
| 5W08_NAG_F_405 | 1% | 49% | 0.188 | 0.552 | 0.42 | 1.42 | - | 1 | 0 | 0 | 100% | 1 |
| 5W08_NAG_E_405 | 1% | 37% | 0.187 | 0.516 | 0.88 | 1.51 | 1 | 3 | 1 | 0 | 100% | 1 |
| 5W08_NAG_D_406 | 1% | 62% | 0.181 | 0.5 | 0.23 | 1.02 | - | 1 | 14 | 0 | 100% | 1 |
| 5W08_NAG_C_401 | 1% | 82% | 0.181 | 0.476 | 0.31 | 0.44 | - | - | 0 | 0 | 100% | 1 |
| 5W08_NAG_A_408 | 1% | 67% | 0.209 | 0.484 | 0.38 | 0.7 | - | - | 2 | 0 | 100% | 1 |
| 5W08_NAG_D_405 | 0% | 51% | 0.23 | 0.261 | 0.42 | 1.3 | - | 3 | 11 | 0 | 100% | 1 |
| 4O5I_NAG_I_413 | 78% | 61% | 0.078 | 0.969 | 0.48 | 0.81 | - | 1 | 0 | 0 | 100% | 1 |
| 4WE8_NAG_A_608 | 67% | 54% | 0.083 | 0.925 | 0.49 | 1.11 | - | 1 | 0 | 0 | 100% | 1 |
| 8FAW_NAG_A_601 | 55% | 31% | 0.101 | 0.9 | 0.67 | 2.01 | - | 4 | 1 | 0 | 100% | 1 |
| 4O5N_NAG_A_408 | 52% | 51% | 0.103 | 0.889 | 0.64 | 1.08 | - | 2 | 0 | 0 | 100% | 1 |
| 9B7I_NAG_a_601 | 52% | 81% | 0.089 | 0.865 | 0.29 | 0.48 | - | - | 0 | 0 | 100% | 1 |
| 2QFR_NAG_B_451 | 100% | 63% | 0.013 | 0.998 | 0.49 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
| 5LDS_NAG_C_1003 | 100% | 65% | 0.016 | 0.997 | 0.54 | 0.62 | - | - | 3 | 0 | 100% | 1 |
| 7DDF_NAG_B_401 | 100% | 84% | 0.016 | 0.996 | 0.21 | 0.49 | - | - | 0 | 0 | 100% | 1 |
| 2HQM_NAG_A_1301 | 100% | 61% | 0.018 | 0.996 | 0.59 | 0.7 | - | - | 0 | 0 | 100% | 1 |
| 3THD_NAG_B_702 | 100% | 48% | 0.019 | 0.995 | 0.71 | 1.18 | - | - | 0 | 0 | 100% | 1 |














