Annotations: 6T34

Atomic model for Turnip mosaic virus (TuMV)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Y [auth M]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
W [auth L]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
U [auth K]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
S [auth J]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
Q [auth I]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
O [auth H]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
M [auth G]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
KA [auth S]	SCOP2 Family	PepMV Coat protein-like	8094087	4005718	SCOP2 (2022-06-29)
KA [auth S]	SCOP2 Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2 (2022-06-29)
K [auth F]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
IA [auth R]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
I [auth E]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
GA [auth Q]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
G [auth D]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
EA [auth P]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
CA [auth O]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
AA [auth N]	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	PepMV Coat protein-like	8094088	3002401	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Y [auth M]	NDK	e6t34M1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
W [auth L]	NDK	e6t34L1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
U [auth K]	NDK	e6t34K1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
S [auth J]	NDK	e6t34J1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
Q [auth I]	NDK	e6t34I1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
O [auth H]	NDK	e6t34H1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
M [auth G]	NDK	e6t34G1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
KA [auth S]	NDK	e6t34S1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
K [auth F]	NDK	e6t34F1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
IA [auth R]	NDK	e6t34R1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
I [auth E]	NDK	e6t34E1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
GA [auth Q]	NDK	e6t34Q1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
G [auth D]	NDK	e6t34D1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
EA [auth P]	NDK	e6t34P1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
E [auth C]	NDK	e6t34C1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
CA [auth O]	NDK	e6t34O1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
C [auth B]	NDK	e6t34B1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
AA [auth N]	NDK	e6t34N1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)
A	NDK	e6t34A1	A: beta barrels	X: jelly-roll	H: DUF1107-like	T: DUF1107-like	F: NDK	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth a], BA [auth n], D [auth b], DA [auth o], F [auth c], B [auth a], BA [auth n], D [auth b], DA [auth o], F [auth c], FA [auth p], H [auth d], HA [auth q], J [auth e], JA [auth r], L [auth f], LA [auth s], N [auth g], P [auth h], R [auth i], T [auth j], V [auth k], X [auth l], Z [auth m]	RNA (5'-R(PUPUPUPUP*U)-3')	-	-	-
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth R], K [auth F], KA [auth S], M [auth G], O [auth H], Q [auth I], S [auth J], U [auth K], W [auth L], Y [auth M]	Coat protein	-	-	viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth R], K [auth F], KA [auth S], M [auth G], O [auth H], Q [auth I], S [auth J], U [auth K], W [auth L], Y [auth M]	IPR001592	Potyvirus coat protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6T34 | pdb_00006t34

Atomic model for Turnip mosaic virus (TuMV)

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage