Annotations: 2MPN

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	YgaP, transmembrane domain	8091562	3002520	SCOP2B (2022-06-29)
A	SCOP2 Family	YgaP, transmembrane domain	8045975	4004795	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YgaP, transmembrane domain	8091562	3002520	SCOP2 (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e2mpnB1	A: a/b three-layered sandwiches	X: avirulence protein AvrPiz-t homologs	H: avirulence protein AvrPiz-t homologs	T: avirulence protein AvrPiz-t homologs	F:	ECOD (v294.1)
A	Ribosomal_S10	e2mpnA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Ribosomal protein S10	T: Ribosomal protein S10	F: Ribosomal_S10	ECOD (v294.1)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	6.10.140.1340	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
A	6.10.140.1340	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)

Chains	Accession	Name	Description	Comments	Source
A, B	PF11127	Inner membrane protein YgaP-like, transmembrane domain (YgaP-like_TM)	Inner membrane protein YgaP-like, transmembrane domain	This domain is found in proteins from bacteria and archaea, including Inner membrane protein YgaP from Escherichia coli, a membrane protein with a rhodanese domain (Pfam: PF00581) that may have sulfurtransferase activity. YgaP adopts a dimeric assemb ...	This domain is found in proteins from bacteria and archaea, including Inner membrane protein YgaP from Escherichia coli, a membrane protein with a rhodanese domain (Pfam: PF00581) that may have sulfurtransferase activity. YgaP adopts a dimeric assembly. This entry represents the transmembrane domain. It consist of two slightly tilted alpha-helices [1]. Structure prediction suggests that this region may homodimerise to form a 4 helical bundle.	Domain

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Inner membrane protein YgaP	thiosulfate-cyanide sulfurtransferase activity sulfurtransferase activity transferase activity, transferring sulphur-containing groups transferase activity catalytic activity	-	cell periphery cellular anatomical structure plasma membrane membrane

Chains	Accession	Name	Type
A, B	IPR001763	Rhodanese-like domain	Domain
A, B	IPR036873	Rhodanese-like domain superfamily	Homologous Superfamily
A, B	IPR021309	Inner membrane protein YgaP-like, transmembrane domain	Domain

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Transmembrane	Alpha-helical polytopic	Rhodanese	Rhodanese

Chains	External Link	Comment
A, B	PDBTM	Annotated as membrane protein by PDBTM

Chains	External Link	Comment
A, B	MemProtMD	Annotated as membrane protein by MemProtMD

Chains	Resource Link	Group	Subgroup	Protein
A, B	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Rhodaneses	YgaP rhodanese homodimeric transmembrane domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2MPN | pdb_00002mpn