9T0Z | pdb_00009t0z

HPFcold Bound Hibernating C. burnetii 30S Ribosome

PDB DOI: https://doi.org/10.2210/pdb9T0Z/pdb
NAKB: 9T0Z
EM Map EMD-55416: EMDB EMDataResource

Classification: RIBOSOME
Organism(s): Coxiella burnetii
Mutation(s): No

Deposited: 2025-10-20 Released: 2026-04-22
Deposition Author(s): Stuart, W.S., Isupov, M.N., Harmer, N.J.
Funding Organization(s): Biotechnology and Biological Sciences Research Council (BBSRC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Starting Models: in silico
View more details

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

HPFcold Bound Hibernating C. burnetii 30S Ribosome

Stuart, W.S., Isupov, M.N., McLaren, M., Jenkins, C.H., Monier, A., Daum, B., Norville, I.H., Gold, V.A.M., Harmer, N.J.

To be published.

Macromolecule Content

Total Structure Weight: 802.81 kDa
Atom Count: 52,223
Modeled Residue Count: 3,949
Deposited Residue Count: 4,207
Unique protein chains: 21
Unique nucleic acid chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS13	A [auth M]	119	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for P59753 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore P59753 Go to UniProtKB: P59753
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P59753
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Reference Sequence

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS14	B [auth N]	99	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ER3 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ER3 Go to UniProtKB: Q83ER3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ER3
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Reference Sequence

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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosome hibernation promoting factor	C [auth 9]	183	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83FC0 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83FC0 Go to UniProtKB: Q83FC0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83FC0
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Reference Sequence

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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS19	D [auth S]	95	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ES0 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ES0 Go to UniProtKB: Q83ES0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ES0
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Reference Sequence

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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS15	F [auth O]	89	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83D88 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83D88 Go to UniProtKB: Q83D88
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83D88
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Reference Sequence

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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS3	G [auth C]	227	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for O85388 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore O85388 Go to UniProtKB: O85388
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O85388
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Reference Sequence

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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS9	H [auth I]	139	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83AX9 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83AX9 Go to UniProtKB: Q83AX9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83AX9
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Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein bS21	I [auth U]	74	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83BB9 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83BB9 Go to UniProtKB: Q83BB9
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83BB9
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Reference Sequence

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Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein bS6	J [auth F]	127	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83D76 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83D76 Go to UniProtKB: Q83D76
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83D76
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Reference Sequence

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Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein bS20	K [auth T]	90	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ED6 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ED6 Go to UniProtKB: Q83ED6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ED6
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Reference Sequence

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Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS4	L [auth D]	206	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83EQ3 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83EQ3 Go to UniProtKB: Q83EQ3
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83EQ3
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Reference Sequence

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Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS5	M [auth E]	168	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83EQ9 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83EQ9 Go to UniProtKB: Q83EQ9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83EQ9
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Reference Sequence

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Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS8	N [auth H]	130	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ER2 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ER2 Go to UniProtKB: Q83ER2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ER2
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Reference Sequence

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Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein bS16	O [auth P]	137	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83E83 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83E83 Go to UniProtKB: Q83E83
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83E83
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Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS12	P [auth L]	124	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ES9 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ES9 Go to UniProtKB: Q83ES9
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ES9
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Reference Sequence

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Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS17	Q	89	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ER7 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ER7 Go to UniProtKB: Q83ER7
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ER7
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Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
Large ribosomal subunit protein bL31	R [auth 4]	79	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83D39 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83D39 Go to UniProtKB: Q83D39
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83D39
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Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS7	S [auth G]	191	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ES8 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ES8 Go to UniProtKB: Q83ES8
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ES8
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Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS10	T [auth J]	110	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83ES5 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83ES5 Go to UniProtKB: Q83ES5
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83ES5
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Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein uS11	U [auth K]	123	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83EQ4 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83EQ4 Go to UniProtKB: Q83EQ4
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83EQ4
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Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
Small ribosomal subunit protein bS18	V [auth R]	73	Coxiella burnetii	Mutation(s): 0
UniProt
Find proteins for Q83D75 (Coxiella burnetii (strain RSA 493 / Nine Mile phase I)) Explore Q83D75 Go to UniProtKB: Q83D75
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Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q83D75
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Reference Sequence

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Molecule	Chains	Length	Organism
Entity ID: 5
16S ribosomal RNA	E [auth A]	1,535	Coxiella burnetii
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Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain GD [auth R] SDF format, chain W [auth N] MOL2 format, chain GD [auth R] MOL2 format, chain W [auth N] mmCIF format, chain GD [auth R] mmCIF format, chain W [auth N]	GD [auth R], W [auth N]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain GD [auth R] Focus chain W [auth N] Interactions & Density Focus chain GD [auth R] Focus chain W [auth N]
K Query on K Download:Ideal Coordinates CCD File SDF format, chain AA [auth A] SDF format, chain AB [auth A] SDF format, chain BA [auth A] SDF format, chain BB [auth A] SDF format, chain CA [auth A] SDF format, chain CB [auth A] SDF format, chain DA [auth A] SDF format, chain DB [auth A] SDF format, chain EA [auth A] SDF format, chain EB [auth A] SDF format, chain FA [auth A] SDF format, chain GA [auth A] SDF format, chain HA [auth A] SDF format, chain IA [auth A] SDF format, chain JA [auth A] SDF format, chain KA [auth A] SDF format, chain LA [auth A] SDF format, chain MA [auth A] SDF format, chain NA [auth A] SDF format, chain OA [auth A] SDF format, chain PA [auth A] SDF format, chain QA [auth A] SDF format, chain RA [auth A] SDF format, chain SA [auth A] SDF format, chain TA [auth A] SDF format, chain UA [auth A] SDF format, chain VA [auth A] SDF format, chain WA [auth A] SDF format, chain X [auth A] SDF format, chain XA [auth A] SDF format, chain Y [auth A] SDF format, chain YA [auth A] SDF format, chain Z [auth A] SDF format, chain ZA [auth A] MOL2 format, chain AA [auth A] MOL2 format, chain AB [auth A] MOL2 format, chain BA [auth A] MOL2 format, chain BB [auth A] MOL2 format, chain CA [auth A] MOL2 format, chain CB [auth A] MOL2 format, chain DA [auth A] MOL2 format, chain DB [auth A] MOL2 format, chain EA [auth A] MOL2 format, chain EB [auth A] MOL2 format, chain FA [auth A] MOL2 format, chain GA [auth A] MOL2 format, chain HA [auth A] MOL2 format, chain IA [auth A] MOL2 format, chain JA [auth A] MOL2 format, chain KA [auth A] MOL2 format, chain LA [auth A] MOL2 format, chain MA [auth A] MOL2 format, chain NA [auth A] MOL2 format, chain OA [auth A] MOL2 format, chain PA [auth A] MOL2 format, chain QA [auth A] MOL2 format, chain RA [auth A] MOL2 format, chain SA [auth A] MOL2 format, chain TA [auth A] MOL2 format, chain UA [auth A] MOL2 format, chain VA [auth A] MOL2 format, chain WA [auth A] MOL2 format, chain X [auth A] MOL2 format, chain XA [auth A] MOL2 format, chain Y [auth A] MOL2 format, chain YA [auth A] MOL2 format, chain Z [auth A] MOL2 format, chain ZA [auth A] mmCIF format, chain AA [auth A] mmCIF format, chain AB [auth A] mmCIF format, chain BA [auth A] mmCIF format, chain BB [auth A] mmCIF format, chain CA [auth A] mmCIF format, chain CB [auth A] mmCIF format, chain DA [auth A] mmCIF format, chain DB [auth A] mmCIF format, chain EA [auth A] mmCIF format, chain EB [auth A] mmCIF format, chain FA [auth A] mmCIF format, chain GA [auth A] mmCIF format, chain HA [auth A] mmCIF format, chain IA [auth A] mmCIF format, chain JA [auth A] mmCIF format, chain KA [auth A] mmCIF format, chain LA [auth A] mmCIF format, chain MA [auth A] mmCIF format, chain NA [auth A] mmCIF format, chain OA [auth A] mmCIF format, chain PA [auth A] mmCIF format, chain QA [auth A] mmCIF format, chain RA [auth A] mmCIF format, chain SA [auth A] mmCIF format, chain TA [auth A] mmCIF format, chain UA [auth A] mmCIF format, chain VA [auth A] mmCIF format, chain WA [auth A] mmCIF format, chain X [auth A] mmCIF format, chain XA [auth A] mmCIF format, chain Y [auth A] mmCIF format, chain YA [auth A] mmCIF format, chain Z [auth A] mmCIF format, chain ZA [auth A]	AA [auth A] AB [auth A] BA [auth A] BB [auth A] CA [auth A] AA [auth A], AB [auth A], BA [auth A], BB [auth A], CA [auth A], CB [auth A], DA [auth A], DB [auth A], EA [auth A], EB [auth A], FA [auth A], GA [auth A], HA [auth A], IA [auth A], JA [auth A], KA [auth A], LA [auth A], MA [auth A], NA [auth A], OA [auth A], PA [auth A], QA [auth A], RA [auth A], SA [auth A], TA [auth A], UA [auth A], VA [auth A], WA [auth A], X [auth A], XA [auth A], Y [auth A], YA [auth A], Z [auth A], ZA [auth A]	POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N		Interactions Focus chain AA [auth A] Focus chain AB [auth A] Focus chain BA [auth A] Focus chain BB [auth A] Focus chain CA [auth A] Focus chain CB [auth A] Focus chain DA [auth A] Focus chain DB [auth A] Focus chain EA [auth A] Focus chain EB [auth A] Focus chain FA [auth A] Focus chain GA [auth A] Focus chain HA [auth A] Focus chain IA [auth A] Focus chain JA [auth A] Focus chain KA [auth A] Focus chain LA [auth A] Focus chain MA [auth A] Focus chain NA [auth A] Focus chain OA [auth A] Focus chain PA [auth A] Focus chain QA [auth A] Focus chain RA [auth A] Focus chain SA [auth A] Focus chain TA [auth A] Focus chain UA [auth A] Focus chain VA [auth A] Focus chain WA [auth A] Focus chain X [auth A] Focus chain XA [auth A] Focus chain Y [auth A] Focus chain YA [auth A] Focus chain Z [auth A] Focus chain ZA [auth A] Interactions & Density Focus chain AA [auth A] Focus chain AB [auth A] Focus chain BA [auth A] Focus chain BB [auth A] Focus chain CA [auth A] Focus chain CB [auth A] Focus chain DA [auth A] Focus chain DB [auth A] Focus chain EA [auth A] Focus chain EB [auth A] Focus chain FA [auth A] Focus chain GA [auth A] Focus chain HA [auth A] Focus chain IA [auth A] Focus chain JA [auth A] Focus chain KA [auth A] Focus chain LA [auth A] Focus chain MA [auth A] Focus chain NA [auth A] Focus chain OA [auth A] Focus chain PA [auth A] Focus chain QA [auth A] Focus chain RA [auth A] Focus chain SA [auth A] Focus chain TA [auth A] Focus chain UA [auth A] Focus chain VA [auth A] Focus chain WA [auth A] Focus chain X [auth A] Focus chain XA [auth A] Focus chain Y [auth A] Focus chain YA [auth A] Focus chain Z [auth A] Focus chain ZA [auth A]
MG Query on MG Download:Ideal Coordinates CCD File SDF format, chain AC [auth A] SDF format, chain AD [auth A] SDF format, chain BC [auth A] SDF format, chain BD [auth A] SDF format, chain CC [auth A] SDF format, chain CD [auth A] SDF format, chain DC [auth A] SDF format, chain DD [auth A] SDF format, chain EC [auth A] SDF format, chain ED [auth A] SDF format, chain FB [auth A] SDF format, chain FC [auth A] SDF format, chain FD [auth A] SDF format, chain GB [auth A] SDF format, chain GC [auth A] SDF format, chain HB [auth A] SDF format, chain HC [auth A] SDF format, chain IB [auth A] SDF format, chain IC [auth A] SDF format, chain JB [auth A] SDF format, chain JC [auth A] SDF format, chain KB [auth A] SDF format, chain KC [auth A] SDF format, chain LB [auth A] SDF format, chain LC [auth A] SDF format, chain MB [auth A] SDF format, chain MC [auth A] SDF format, chain NB [auth A] SDF format, chain NC [auth A] SDF format, chain OB [auth A] SDF format, chain OC [auth A] SDF format, chain PB [auth A] SDF format, chain PC [auth A] SDF format, chain QB [auth A] SDF format, chain QC [auth A] SDF format, chain RB [auth A] SDF format, chain RC [auth A] SDF format, chain SB [auth A] SDF format, chain SC [auth A] SDF format, chain TB [auth A] SDF format, chain TC [auth A] SDF format, chain UB [auth A] SDF format, chain UC [auth A] SDF format, chain VB [auth A] SDF format, chain VC [auth A] SDF format, chain WB [auth A] SDF format, chain WC [auth A] SDF format, chain XB [auth A] SDF format, chain XC [auth A] SDF format, chain YB [auth A] SDF format, chain YC [auth A] SDF format, chain ZB [auth A] SDF format, chain ZC [auth A] MOL2 format, chain AC [auth A] MOL2 format, chain AD [auth A] MOL2 format, chain BC [auth A] MOL2 format, chain BD [auth A] MOL2 format, chain CC [auth A] MOL2 format, chain CD [auth A] MOL2 format, chain DC [auth A] MOL2 format, chain DD [auth A] MOL2 format, chain EC [auth A] MOL2 format, chain ED [auth A] MOL2 format, chain FB [auth A] MOL2 format, chain FC [auth A] MOL2 format, chain FD [auth A] MOL2 format, chain GB [auth A] MOL2 format, chain GC [auth A] MOL2 format, chain HB [auth A] MOL2 format, chain HC [auth A] MOL2 format, chain IB [auth A] MOL2 format, chain IC [auth A] MOL2 format, chain JB [auth A] MOL2 format, chain JC [auth A] MOL2 format, chain KB [auth A] MOL2 format, chain KC [auth A] MOL2 format, chain LB [auth A] MOL2 format, chain LC [auth A] MOL2 format, chain MB [auth A] MOL2 format, chain MC [auth A] MOL2 format, chain NB [auth A] MOL2 format, chain NC [auth A] MOL2 format, chain OB [auth A] MOL2 format, chain OC [auth A] MOL2 format, chain PB [auth A] MOL2 format, chain PC [auth A] MOL2 format, chain QB [auth A] MOL2 format, chain QC [auth A] MOL2 format, chain RB [auth A] MOL2 format, chain RC [auth A] MOL2 format, chain SB [auth A] MOL2 format, chain SC [auth A] MOL2 format, chain TB [auth A] MOL2 format, chain TC [auth A] MOL2 format, chain UB [auth A] MOL2 format, chain UC [auth A] MOL2 format, chain VB [auth A] MOL2 format, chain VC [auth A] MOL2 format, chain WB [auth A] MOL2 format, chain WC [auth A] MOL2 format, chain XB [auth A] MOL2 format, chain XC [auth A] MOL2 format, chain YB [auth A] MOL2 format, chain YC [auth A] MOL2 format, chain ZB [auth A] MOL2 format, chain ZC [auth A] mmCIF format, chain AC [auth A] mmCIF format, chain AD [auth A] mmCIF format, chain BC [auth A] mmCIF format, chain BD [auth A] mmCIF format, chain CC [auth A] mmCIF format, chain CD [auth A] mmCIF format, chain DC [auth A] mmCIF format, chain DD [auth A] mmCIF format, chain EC [auth A] mmCIF format, chain ED [auth A] mmCIF format, chain FB [auth A] mmCIF format, chain FC [auth A] mmCIF format, chain FD [auth A] mmCIF format, chain GB [auth A] mmCIF format, chain GC [auth A] mmCIF format, chain HB [auth A] mmCIF format, chain HC [auth A] mmCIF format, chain IB [auth A] mmCIF format, chain IC [auth A] mmCIF format, chain JB [auth A] mmCIF format, chain JC [auth A] mmCIF format, chain KB [auth A] mmCIF format, chain KC [auth A] mmCIF format, chain LB [auth A] mmCIF format, chain LC [auth A] mmCIF format, chain MB [auth A] mmCIF format, chain MC [auth A] mmCIF format, chain NB [auth A] mmCIF format, chain NC [auth A] mmCIF format, chain OB [auth A] mmCIF format, chain OC [auth A] mmCIF format, chain PB [auth A] mmCIF format, chain PC [auth A] mmCIF format, chain QB [auth A] mmCIF format, chain QC [auth A] mmCIF format, chain RB [auth A] mmCIF format, chain RC [auth A] mmCIF format, chain SB [auth A] mmCIF format, chain SC [auth A] mmCIF format, chain TB [auth A] mmCIF format, chain TC [auth A] mmCIF format, chain UB [auth A] mmCIF format, chain UC [auth A] mmCIF format, chain VB [auth A] mmCIF format, chain VC [auth A] mmCIF format, chain WB [auth A] mmCIF format, chain WC [auth A] mmCIF format, chain XB [auth A] mmCIF format, chain XC [auth A] mmCIF format, chain YB [auth A] mmCIF format, chain YC [auth A] mmCIF format, chain ZB [auth A] mmCIF format, chain ZC [auth A]	AC [auth A] AD [auth A] BC [auth A] BD [auth A] CC [auth A] AC [auth A], AD [auth A], BC [auth A], BD [auth A], CC [auth A], CD [auth A], DC [auth A], DD [auth A], EC [auth A], ED [auth A], FB [auth A], FC [auth A], FD [auth A], GB [auth A], GC [auth A], HB [auth A], HC [auth A], IB [auth A], IC [auth A], JB [auth A], JC [auth A], KB [auth A], KC [auth A], LB [auth A], LC [auth A], MB [auth A], MC [auth A], NB [auth A], NC [auth A], OB [auth A], OC [auth A], PB [auth A], PC [auth A], QB [auth A], QC [auth A], RB [auth A], RC [auth A], SB [auth A], SC [auth A], TB [auth A], TC [auth A], UB [auth A], UC [auth A], VB [auth A], VC [auth A], WB [auth A], WC [auth A], XB [auth A], XC [auth A], YB [auth A], YC [auth A], ZB [auth A], ZC [auth A]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain AC [auth A] Focus chain AD [auth A] Focus chain BC [auth A] Focus chain BD [auth A] Focus chain CC [auth A] Focus chain CD [auth A] Focus chain DC [auth A] Focus chain DD [auth A] Focus chain EC [auth A] Focus chain ED [auth A] Focus chain FB [auth A] Focus chain FC [auth A] Focus chain FD [auth A] Focus chain GB [auth A] Focus chain GC [auth A] Focus chain HB [auth A] Focus chain HC [auth A] Focus chain IB [auth A] Focus chain IC [auth A] Focus chain JB [auth A] Focus chain JC [auth A] Focus chain KB [auth A] Focus chain KC [auth A] Focus chain LB [auth A] Focus chain LC [auth A] Focus chain MB [auth A] Focus chain MC [auth A] Focus chain NB [auth A] Focus chain NC [auth A] Focus chain OB [auth A] Focus chain OC [auth A] Focus chain PB [auth A] Focus chain PC [auth A] Focus chain QB [auth A] Focus chain QC [auth A] Focus chain RB [auth A] Focus chain RC [auth A] Focus chain SB [auth A] Focus chain SC [auth A] Focus chain TB [auth A] Focus chain TC [auth A] Focus chain UB [auth A] Focus chain UC [auth A] Focus chain VB [auth A] Focus chain VC [auth A] Focus chain WB [auth A] Focus chain WC [auth A] Focus chain XB [auth A] Focus chain XC [auth A] Focus chain YB [auth A] Focus chain YC [auth A] Focus chain ZB [auth A] Focus chain ZC [auth A] Interactions & Density Focus chain AC [auth A] Focus chain AD [auth A] Focus chain BC [auth A] Focus chain BD [auth A] Focus chain CC [auth A] Focus chain CD [auth A] Focus chain DC [auth A] Focus chain DD [auth A] Focus chain EC [auth A] Focus chain ED [auth A] Focus chain FB [auth A] Focus chain FC [auth A] Focus chain FD [auth A] Focus chain GB [auth A] Focus chain GC [auth A] Focus chain HB [auth A] Focus chain HC [auth A] Focus chain IB [auth A] Focus chain IC [auth A] Focus chain JB [auth A] Focus chain JC [auth A] Focus chain KB [auth A] Focus chain KC [auth A] Focus chain LB [auth A] Focus chain LC [auth A] Focus chain MB [auth A] Focus chain MC [auth A] Focus chain NB [auth A] Focus chain NC [auth A] Focus chain OB [auth A] Focus chain OC [auth A] Focus chain PB [auth A] Focus chain PC [auth A] Focus chain QB [auth A] Focus chain QC [auth A] Focus chain RB [auth A] Focus chain RC [auth A] Focus chain SB [auth A] Focus chain SC [auth A] Focus chain TB [auth A] Focus chain TC [auth A] Focus chain UB [auth A] Focus chain UC [auth A] Focus chain VB [auth A] Focus chain VC [auth A] Focus chain WB [auth A] Focus chain WC [auth A] Focus chain XB [auth A] Focus chain XC [auth A] Focus chain YB [auth A] Focus chain YC [auth A] Focus chain ZB [auth A] Focus chain ZC [auth A]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
RECONSTRUCTION	cryoSPARC	4
MODEL REFINEMENT	REFMAC	5.8.0258

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2026-04-22

Deposition Author(s):

Stuart, W.S.

Isupov, M.N.

Harmer, N.J.

Funding Organization	Location	Grant Number
Biotechnology and Biological Sciences Research Council (BBSRC)	United Kingdom	BB/M009122/1

Revision History (Full details and data files)

Version 1.0: 2026-04-22
Type: Initial release

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9T0Z | pdb_00009t0z

HPFcold Bound Hibernating C. burnetii 30S Ribosome

Literature

HPFcold Bound Hibernating C. burnetii 30S Ribosome

Biological Assembly 1

Macromolecules

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