Download Mendeleyss-dsDNA-FANCD2-FANCI complex
Alcon, P., Passmore, L.A.To be published.
9FFB
ss-dsDNA-FANCD2-FANCI complex
- PDB DOI: https://doi.org/10.2210/pdb9FFB/pdb
- EM Map EMD-50353: EMDB EMDataResource
- Classification: DNA BINDING PROTEIN
- Organism(s): synthetic construct, Gallus gallus
- Expression System: Spodoptera frugiperda
- Mutation(s): No
- Deposited: 2024-05-22 Released: 2024-07-31
- Funding Organization(s): UK Research and Innovation (UKRI)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.59 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fanconi anemia protein FANCD2 | C [auth A] | 1,475 | Gallus gallus | Mutation(s): 0 Gene Names: fancd2 |  |
UniProt | |||||
Find proteins for Q68Y81 (Gallus gallus) Explore Q68Y81 Go to UniProtKB: Q68Y81 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q68Y81 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fanconi anemia complementation group I | D [auth B] | 1,338 | Gallus gallus | Mutation(s): 0 Gene Names: FANCI |  |
UniProt | |||||
Find proteins for B0I564 (Gallus gallus) Explore B0I564 Go to UniProtKB: B0I564 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B0I564 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| DNA (5'-D(P*GP*CP*AP*GP*CP*TP*GP*TP*CP*TP*AP*GP*AP*GP*AP*CP*AP*TP*CP*GP*AP*T)-3') | A [auth S] | 22 | synthetic construct |  | |
Sequence AnnotationsExpand | |||||
| |||||
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| DNA (5'-D(P*CP*GP*AP*TP*GP*TP*CP*TP*CP*TP*AP*GP*AP*CP*AP*GP*CP*TP*GP*C)-3') | B [auth T] | 20 | synthetic construct |  | |
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.59 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| MODEL REFINEMENT | PHENIX | 1.20.1_4487: |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-07-31 Deposition Author(s): Alcon, P., Passmore, L.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| UK Research and Innovation (UKRI) | United Kingdom | MC_U105192715 |
Revision History (Full details and data files)
- Version 1.0: 2024-07-31
Type: Initial release
