Improved correlations with score, hit-rate, and affinity as docking library and testing scale increase
Liu, F., Shoichet, B.K.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
AmpC Beta-lactamase | 377 | Escherichia coli | Mutation(s): 0  Gene Names: ampC, ampA, b4150, JW4111 EC: 3.5.2.6 | ![]() | |
UniProt | |||||
Find proteins for P00811 (Escherichia coli (strain K12)) Explore P00811  Go to UniProtKB:  P00811 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00811 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1AU5 (Subject of Investigation/LOI) Query on A1AU5 | C [auth A], D [auth B] | N-(1-acetyl-2,3-dihydro-1H-indol-4-yl)-3-chloro-2-hydroxybenzene-1-sulfonamide C16 H15 Cl N2 O4 S OIXKKLRRYRMQMK-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 118.23 | α = 90 |
b = 76.9 | β = 116.54 |
c = 97.69 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | -- |