CDCA7 is a hemimethylated DNA adaptor for the nucleosome remodeler HELLS
Wassing, I., Nishiyama, A., Arita, K., Funabiki, H.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Histone H3.1 | 135 | Homo sapiens | Mutation(s): 0  Gene Names:  H3C1, H3FA, HIST1H3A, H3C2, H3FL, HIST1H3B, H3C3, H3FC HIST1H3C, H3C4, H3FB... | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P68431 (Homo sapiens) Explore P68431  Go to UniProtKB:  P68431 | |||||
PHAROS:  P68431 GTEx:  ENSG00000197409  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P68431 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Histone H4 | 102 | Homo sapiens | Mutation(s): 0  | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62805 (Homo sapiens) Explore P62805  Go to UniProtKB:  P62805 | |||||
PHAROS:  P62805 GTEx:  ENSG00000274618  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62805 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Histone H2A type 1-B/E | 129 | Homo sapiens | Mutation(s): 0  Gene Names: H2AC4, H2AFM, HIST1H2AB, H2AC8, H2AFA, HIST1H2AE | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P04908 (Homo sapiens) Explore P04908  Go to UniProtKB:  P04908 | |||||
PHAROS:  P04908 GTEx:  ENSG00000277075  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P04908 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Histone H2B type 1-K | 125 | Homo sapiens | Mutation(s): 0  Gene Names: H2BC12, H2BFT, HIRIP1, HIST1H2BK | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O60814 (Homo sapiens) Explore O60814  Go to UniProtKB:  O60814 | |||||
PHAROS:  O60814 GTEx:  ENSG00000197903  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O60814 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cell division cycle-associated protein 7 | 108 | Homo sapiens | Mutation(s): 1  Gene Names: CDCA7, JPO1 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9BWT1 (Homo sapiens) Explore Q9BWT1  Go to UniProtKB:  Q9BWT1 | |||||
PHAROS:  Q9BWT1 GTEx:  ENSG00000144354  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9BWT1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (132-MER) | 145 | synthetic construct | ![]() | ||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (132-MER) | 145 | synthetic construct | ![]() | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | L [auth K], M [auth K], N [auth K] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Funding Organization | Location | Grant Number |
---|---|---|
Japan Society for the Promotion of Science (JSPS) | Japan | JP19H05740, JP19H03143, JP19H05285, JP19H05741 |
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | R35GM132111, R35GM133780 |