8Y0R

Complex of FMDV A/WH/CHA/09 and inter-serotype broadly neutralizing antibodies pOA-2

• PDB DOI: https://doi.org/10.2210/pdb8Y0R/pdb
• EM Map EMD-38815: EMDB EMDataResource

• Classification: VIRUS/IMMUNE SYSTEM
• Organism(s): Foot-and-mouth disease virus A, Sus scrofa
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2024-01-23 Released: 2024-10-09 
• Deposition Author(s): Wu, S., Lei, D.
• Funding Organization(s): National Natural Science Foundation of China (NSFC), Other government

---

Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.52 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Discovery, evolution and recognizing antigenic structures of cross-serotype broadly neutralizing antibodies from porcine B-cell repertoires against foot-and-mouth disease virus

Li, F., Wu, S., Huang, S., Zerang, Z., Zhang, Z., Li, P., Cao, Y., Bao, H., Sun, P., Bai, X., Fu, Y., Yuan, H., Ma, X., Zhao, Z., Zhang, J., Wang, J., Wang, T., Li, D., Zhang, Q., Liu, Z., Lu, Z., Lei, D., Li, K.

To be published.

Biological Assembly 1  

Global Symmetry: Icosahedral - I  (Explore in 3D)
Global Stoichiometry: Hetero 360-mer - A60B60C60D60E60F60 Pseudo Symmetry: Icosahedral - I  (Explore in 3D)
Pseudo Stoichiometry: Hetero 360-mer - A120B120C60D60 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 106.19 kDa 
• Atom Count: 6,998 
• Modelled Residue Count: 900 
• Deposited Residue Count: 968 
• Unique protein chains: 6

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
VP1 of capsid protein	A [auth 1]	212	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for D0E7R9 (Foot-and-mouth disease virus A) Explore D0E7R9  Go to UniProtKB:  D0E7R9

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
VP2 of capsid protein	B [auth 2]	218	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for D0E7R9 (Foot-and-mouth disease virus A) Explore D0E7R9  Go to UniProtKB:  D0E7R9

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
VP3 of capsid protein	C [auth 3]	221	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for D0E7R9 (Foot-and-mouth disease virus A) Explore D0E7R9  Go to UniProtKB:  D0E7R9

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
VP4 of capsid protein	D [auth 4]	85	Foot-and-mouth disease virus A	Mutation(s): 0
UniProt
Find proteins for E4W502 (Foot-and-mouth disease virus serotype O) Explore E4W502  Go to UniProtKB:  E4W502

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
pOA2 VH	E [auth H]	123	Sus scrofa	Mutation(s): 0

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
pOA2 VL	F [auth L]	109	Sus scrofa	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.52 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-10-09 
Deposition Author(s): Wu, S., Lei, D.

---

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32373028
National Natural Science Foundation of China (NSFC)	China	32171300
National Natural Science Foundation of China (NSFC)	China	32072873
Other government	China	2021YFD1800304
Other government	China	lzujbky-2021-ct05
Other government	China	NCTIP-MY23004

Revision History  

• Version 1.0: 2024-10-09
  Type: Initial release