8Y0Q

Complex of FMDV O/18074 and inter-serotype broadly neutralizing antibodies pOA-2

• PDB DOI: https://doi.org/10.2210/pdb8Y0Q/pdb
• EM Map EMD-38814: EMDB EMDataResource

• Classification: VIRUS/IMMUNE SYSTEM
• Organism(s): Foot-and-mouth disease virus O, Sus scrofa
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2024-01-23 Released: 2024-10-09 
• Deposition Author(s): Wu, S., Lei, D.
• Funding Organization(s): National Natural Science Foundation of China (NSFC), Other government

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 2.44 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Discovery, evolution and recognizing antigenic structures of cross-serotype broadly neutralizing antibodies from porcine B-cell repertoires against foot-and-mouth disease virus

Li, F., Wu, S., Huang, S., Zerang, Z., Zhang, Z., Li, P., Cao, Y., Bao, H., Sun, P., Bai, X., Fu, Y., Yuan, H., Ma, X., Zhao, Z., Zhang, J., Wang, J., Wang, T., Li, D., Zhang, Q., Liu, Z., Lu, Z., Lei, D., Li, K.

To be published.

Biological Assembly 1  

Global Symmetry: Icosahedral - I  (Explore in 3D)
Global Stoichiometry: Hetero 360-mer - A60B60C60D60E60F60 Pseudo Symmetry: Icosahedral - I  (Explore in 3D)
Pseudo Stoichiometry: Hetero 360-mer - A180B120C60 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content

• Total Structure Weight: 106.1 kDa 
• Atom Count: 6,858 
• Modelled Residue Count: 886 
• Deposited Residue Count: 968 
• Unique protein chains: 6

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
VP1 of capsid protein	A [auth 1]	213	Foot-and-mouth disease virus O	Mutation(s): 0
UniProt
Find proteins for A0A1P8DYS7 (Foot-and-mouth disease virus serotype O) Explore A0A1P8DYS7  Go to UniProtKB:  A0A1P8DYS7

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
VP2 of capsid protein	B [auth 2]	218	Foot-and-mouth disease virus O	Mutation(s): 0
UniProt
Find proteins for J9PGT1 (Foot-and-mouth disease virus serotype O) Explore J9PGT1  Go to UniProtKB:  J9PGT1

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
VP3 of capsid protein	C [auth 3]	220	Foot-and-mouth disease virus O	Mutation(s): 0
UniProt
Find proteins for A0A1C6ZW66 (Foot-and-mouth disease virus serotype O) Explore A0A1C6ZW66  Go to UniProtKB:  A0A1C6ZW66

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
VP4 of capsid protein	D [auth 4]	85	Foot-and-mouth disease virus O	Mutation(s): 0
UniProt
Find proteins for J9PGT1 (Foot-and-mouth disease virus serotype O) Explore J9PGT1  Go to UniProtKB:  J9PGT1

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
pOA2 VH	E [auth H]	123	Sus scrofa	Mutation(s): 0

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
pOA2 VL	F [auth L]	109	Sus scrofa	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 2.44 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-10-09 
Deposition Author(s): Wu, S., Lei, D.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32373028
National Natural Science Foundation of China (NSFC)	China	32171300
National Natural Science Foundation of China (NSFC)	China	32072873
Other government		2021YFD1800304
Other government		lzujbky-2021-ct05
Other government		NCTIP-MY23004

Revision History  

• Version 1.0: 2024-10-09
  Type: Initial release