Download MendeleyConformational dynamics of the human Cohesin ATPase module
Vitoria Gomes, M., Landwerlin, P., Durand, A., Diebold-Durand, M.-L., Romier, C.To be published.
8PQ5
Human Cohesin ATPase module with an open DNA exit gate
- PDB DOI: https://doi.org/10.2210/pdb8PQ5/pdb
- EM Map EMD-17820: EMDB EMDataResource
- Classification: DNA BINDING PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-07-10 Released: 2024-09-11
- Funding Organization(s): Fondation ARC, Agence Nationale de la Recherche (ANR)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 4.40 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 1A | 456 | Homo sapiens | Mutation(s): 0 Gene Names: SMC1A, DXS423E, KIAA0178, SB1.8, SMC1, SMC1L1 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 3 | 462 | Homo sapiens | Mutation(s): 0 Gene Names: Smc3, Bam, Bmh, Cspg6, Mmip1, Smc3l1, Smcd |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 64-kDa C-terminal product | 81 | Homo sapiens | Mutation(s): 0 Gene Names: RAD21, HR21, KIAA0078, NXP1, SCC1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O60216 (Homo sapiens) Explore O60216 Go to UniProtKB: O60216 | |||||
PHAROS: O60216 GTEx: ENSG00000164754 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O60216 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ATP (Subject of Investigation/LOI) Query on ATP | D [auth A], E [auth B] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 4.40 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION | |
| MODEL REFINEMENT | PHENIX |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-09-11 Deposition Author(s): Landwerlin, P., Durand, A., Diebold-Durand, M.-L., Romier, C.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Fondation ARC | France | ARCPJA20181208268 |
| Fondation ARC | France | ARCPJA2021060003715 |
| Fondation ARC | France | DOC20180507150 |
| Agence Nationale de la Recherche (ANR) | France | ANR-10-LABX-030-INRT |
| Agence Nationale de la Recherche (ANR) | France | ANR-10-IDEX-0002 |
| Agence Nationale de la Recherche (ANR) | France | ANR-17-EURE-0023 |
| Agence Nationale de la Recherche (ANR) | France | ANR-10-INBS-0005-01 |
Revision History (Full details and data files)
- Version 1.0: 2024-09-11
Type: Initial release
