Download MendeleyThe Cohesin ATPase cycle is mediated by specific conformational dynamics and interface plasticity of SMC1A and SMC3 ATPase domains
Vitoria Gomes, M., Romier, C.To be published.
8ROJ
Human cohesin SMC3-HD/RAD21-C complex - ADP-Mg-bound conformation
- PDB DOI: https://doi.org/10.2210/pdb8ROJ/pdb
- Classification: NUCLEAR PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2024-01-11 Released: 2024-09-11
- Funding Organization(s): Fondation ARC, Agence Nationale de la Recherche (ANR)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.264
- R-Value Work: 0.196
- R-Value Observed: 0.200
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 3 | 462 | Homo sapiens | Mutation(s): 0 Gene Names: SMC3, BAM, BMH, CSPG6, SMC3L1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UQE7 (Homo sapiens) Explore Q9UQE7 Go to UniProtKB: Q9UQE7 | |||||
PHAROS: Q9UQE7 GTEx: ENSG00000108055 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9UQE7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Double-strand-break repair protein rad21 homolog | 110 | Homo sapiens | Mutation(s): 0 Gene Names: RAD21, HR21, KIAA0078, NXP1, SCC1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O60216 (Homo sapiens) Explore O60216 Go to UniProtKB: O60216 | |||||
PHAROS: O60216 GTEx: ENSG00000164754 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O60216 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADP (Subject of Investigation/LOI) Query on ADP | D [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N |  | ||
| MG (Subject of Investigation/LOI) Query on MG | C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.00 Å
- R-Value Free: 0.264
- R-Value Work: 0.196
- R-Value Observed: 0.200
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 89.706 | α = 90 |
| b = 89.706 | β = 90 |
| c = 234.645 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-09-11 Deposition Author(s): Vitoria Gomes, M., Romier, C.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Fondation ARC | France | ARCPJA20181208268 |
| Fondation ARC | France | ARCPJA2021060003715 |
| Fondation ARC | France | DOC20180507150 |
| Agence Nationale de la Recherche (ANR) | France | ANR-10-LABX-030-INRT |
| Agence Nationale de la Recherche (ANR) | France | ANR-10-IDEX-0002 |
| Agence Nationale de la Recherche (ANR) | France | ANR-17-EURE-0023 |
| Agence Nationale de la Recherche (ANR) | France | ANR-10-INBS-0005-01 |
Revision History (Full details and data files)
- Version 1.0: 2024-09-11
Type: Initial release
