8PKZ

NMR solution structure of PilF-GSPIIB in the c-di-GMP bound state

• PDB DOI: https://doi.org/10.2210/pdb8PKZ/pdb
• BMRB: 27853

• Classification: MOTOR PROTEIN
• Organism(s): Thermus thermophilus HB27
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2023-06-27 Released: 2024-07-10 
• Deposition Author(s): Neissner, K., Woehnert, J.
• Funding Organization(s): German Research Foundation (DFG)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

NMR solution structure of GSPIIB of Thermus thermophilus in the c-di-GMP bound state

Neissner, K., Woehnert, J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: NMR Distance Restraints

Macromolecule Content

• Total Structure Weight: 17 kDa 
• Atom Count: 1,194 
• Modelled Residue Count: 146 
• Deposited Residue Count: 146 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ATP-binding motif-containing protein pilF	A	146	Thermus thermophilus HB27	Mutation(s): 2  Gene Names: pilF, TT_C1622
UniProt
Find proteins for Q72H73 (Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)) Explore Q72H73  Go to UniProtKB:  Q72H73

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
5GP (Subject of Investigation/LOI)	B [auth A], C [auth A]	GUANOSINE-5'-MONOPHOSPHATE C10 H14 N5 O8 P RQFCJASXJCIDSX-UUOKFMHZSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-07-10 
Deposition Author(s): Neissner, K., Woehnert, J.

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Funding Organization	Location	Grant Number
German Research Foundation (DFG)	Germany	Wo 901/12-1

Revision History  

• Version 1.0: 2024-07-10
  Type: Initial release