Structure of LmbF in complex with PLP
Mori, T., Lyu, S., Kadlcik, S., Abe, I.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 437 | Streptomyces lincolnensis | Mutation(s): 0  Gene Names: GJU35_01420 | ||
UniProt | |||||
Find proteins for A9Y8R7 (Streptomyces lincolnensis) Explore A9Y8R7  Go to UniProtKB:  A9Y8R7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A9Y8R7 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | C [auth B], D [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
LLP Query on LLP | A, B | L-PEPTIDE LINKING | C14 H22 N3 O7 P | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 67.277 | α = 90 |
b = 74.017 | β = 93.183 |
c = 74.843 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |