8IC2

Respiratory complex CI:CIII2, type I, PERK -/- mouse under cold temperature

PDB DOI: https://doi.org/10.2210/pdb8IC2/pdb
EM Map EMD-35352: EMDB EMDataResource

Classification: ELECTRON TRANSPORT
Organism(s): Mus musculus
Mutation(s): No

Deposited: 2023-02-10 Released: 2024-09-18
Deposition Author(s): Shin, Y.-C., Liao, M.
Funding Organization(s): National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 6.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Respiratory complex CI:CIII2, type I, PERK -/- mouse under cold temperature

Shin, Y.-C., Liao, M.

To be published.

Macromolecule Content

Total Structure Weight: 1,627.35 kDa
Atom Count: 97,017
Modelled Residue Count: 11,910
Deposited Residue Count: 14,118
Unique protein chains: 54

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 3	A	115	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03899 (Mus musculus) Explore P03899 Go to UniProtKB: P03899
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P03899
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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial	B	224	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
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Find proteins for Q9DC70 (Mus musculus) Explore Q9DC70 Go to UniProtKB: Q9DC70
IMPC: MGI:1922656
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UniProt Group	Q9DC70
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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial	C	263	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt & NIH Common Fund Data Resources
Find proteins for Q9DCT2 (Mus musculus) Explore Q9DCT2 Go to UniProtKB: Q9DCT2
IMPC: MGI:1915599
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UniProt Group	Q9DCT2
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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	D	463	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt & NIH Common Fund Data Resources
Find proteins for Q91WD5 (Mus musculus) Explore Q91WD5 Go to UniProtKB: Q91WD5
IMPC: MGI:2385112
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UniProt Group	Q91WD5
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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	E	248	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
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Find proteins for Q9D6J6 (Mus musculus) Explore Q9D6J6 Go to UniProtKB: Q9D6J6
IMPC: MGI:1920150
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9D6J6
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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	F	464	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt & NIH Common Fund Data Resources
Find proteins for Q91YT0 (Mus musculus) Explore Q91YT0 Go to UniProtKB: Q91YT0
IMPC: MGI:107851
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UniProt Group	Q91YT0
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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	G	727	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
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Find proteins for Q91VD9 (Mus musculus) Explore Q91VD9 Go to UniProtKB: Q91VD9
IMPC: MGI:2443241
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q91VD9
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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 1	H	318	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03888 (Mus musculus) Explore P03888 Go to UniProtKB: P03888
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UniProt Group	P03888
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Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial	I	212	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt & NIH Common Fund Data Resources
Find proteins for Q8K3J1 (Mus musculus) Explore Q8K3J1 Go to UniProtKB: Q8K3J1
IMPC: MGI:2385079
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q8K3J1
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Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 6	J	172	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03925 (Mus musculus) Explore P03925 Go to UniProtKB: P03925
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Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P03925
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Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 4L	K	98	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03903 (Mus musculus) Explore P03903 Go to UniProtKB: P03903
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UniProt Group	P03903
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Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 5	L	607	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03921 (Mus musculus) Explore P03921 Go to UniProtKB: P03921
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UniProt Group	P03921
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Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 4	M	459	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03911 (Mus musculus) Explore P03911 Go to UniProtKB: P03911
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UniProt Group	P03911
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Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH-ubiquinone oxidoreductase chain 2	N	345	Mus musculus	Mutation(s): 0 EC: 7.1.1.2
UniProt
Find proteins for P03893 (Mus musculus) Explore P03893 Go to UniProtKB: P03893
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UniProt Group	P03893
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Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	O	355	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q99LC3 (Mus musculus) Explore Q99LC3 Go to UniProtKB: Q99LC3
IMPC: MGI:1914523
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UniProt Group	Q99LC3
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Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	P	377	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9DC69 (Mus musculus) Explore Q9DC69 Go to UniProtKB: Q9DC69
IMPC: MGI:1913358
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UniProt Group	Q9DC69
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Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	Q	175	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CXZ1 (Mus musculus) Explore Q9CXZ1 Go to UniProtKB: Q9CXZ1
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UniProt Group	Q9CXZ1
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Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial	R	116	Mus musculus	Mutation(s): 0
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Find proteins for P52503 (Mus musculus) Explore P52503 Go to UniProtKB: P52503
IMPC: MGI:107932
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UniProt Group	P52503
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Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	S	99	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CQ75 (Mus musculus) Explore Q9CQ75 Go to UniProtKB: Q9CQ75
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UniProt Group	Q9CQ75
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Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
Acyl carrier protein, mitochondrial	T, U	156	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CR21 (Mus musculus) Explore Q9CR21 Go to UniProtKB: Q9CR21
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UniProt Group	Q9CR21
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Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	V	116	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CPP6 (Mus musculus) Explore Q9CPP6 Go to UniProtKB: Q9CPP6
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UniProt Group	Q9CPP6
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Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	W	131	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9CQZ5 (Mus musculus) Explore Q9CQZ5 Go to UniProtKB: Q9CQZ5
IMPC: MGI:1914380
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UniProt Group	Q9CQZ5
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Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	X	172	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9DCJ5 (Mus musculus) Explore Q9DCJ5 Go to UniProtKB: Q9DCJ5
IMPC: MGI:1915625
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UniProt Group	Q9DCJ5
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Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11	Y	143	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for G5E814 (Mus musculus) Explore G5E814 Go to UniProtKB: G5E814
IMPC: MGI:1917125
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UniProt Group	G5E814
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Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13	Z	144	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9ERS2 (Mus musculus) Explore Q9ERS2 Go to UniProtKB: Q9ERS2
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UniProt Group	Q9ERS2
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Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1	AA [auth a]	70	Mus musculus	Mutation(s): 0
UniProt
Find proteins for O35683 (Mus musculus) Explore O35683 Go to UniProtKB: O35683
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UniProt Group	O35683
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Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3	BA [auth b]	84	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CQ91 (Mus musculus) Explore Q9CQ91 Go to UniProtKB: Q9CQ91
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UniProt Group	Q9CQ91
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Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial	CA [auth c]	76	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CQY9 (Mus musculus) Explore Q9CQY9 Go to UniProtKB: Q9CQY9
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UniProt Group	Q9CQY9
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Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 subunit C2	DA [auth d]	120	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CQ54 (Mus musculus) Explore Q9CQ54 Go to UniProtKB: Q9CQ54
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UniProt Group	Q9CQ54
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Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5	EA [auth e]	106	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q99LY9 (Mus musculus) Explore Q99LY9 Go to UniProtKB: Q99LY9
IMPC: MGI:1890889
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UniProt Group	Q99LY9
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Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1	FA [auth f]	57	Mus musculus	Mutation(s): 0
UniProt
Find proteins for P0DN34 (Mus musculus) Explore P0DN34 Go to UniProtKB: P0DN34
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UniProt Group	P0DN34
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Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial	GA [auth g]	151	Mus musculus	Mutation(s): 0
UniProt
Find proteins for O09111 (Mus musculus) Explore O09111 Go to UniProtKB: O09111
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UniProt Group	O09111
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Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial	HA [auth h]	189	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9CQH3 (Mus musculus) Explore Q9CQH3 Go to UniProtKB: Q9CQH3
IMPC: MGI:1913296
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UniProt Group	Q9CQH3
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Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6	IA [auth i]	128	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q3UIU2 (Mus musculus) Explore Q3UIU2 Go to UniProtKB: Q3UIU2
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UniProt Group	Q3UIU2
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Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial	JA [auth j]	105	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CPU2 (Mus musculus) Explore Q9CPU2 Go to UniProtKB: Q9CPU2
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UniProt Group	Q9CPU2
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Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3	KA [auth k]	104	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CQZ6 (Mus musculus) Explore Q9CQZ6 Go to UniProtKB: Q9CQZ6
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UniProt Group	Q9CQZ6
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Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial	LA [auth l]	186	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9D6J5 (Mus musculus) Explore Q9D6J5 Go to UniProtKB: Q9D6J5
IMPC: MGI:1914514
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UniProt Group	Q9D6J5
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Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	MA [auth m]	129	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CQC7 (Mus musculus) Explore Q9CQC7 Go to UniProtKB: Q9CQC7
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UniProt Group	Q9CQC7
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Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9	NA [auth n]	179	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9CQJ8 (Mus musculus) Explore Q9CQJ8 Go to UniProtKB: Q9CQJ8
IMPC: MGI:1913468
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UniProt Group	Q9CQJ8
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Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7	OA [auth o]	137	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CR61 (Mus musculus) Explore Q9CR61 Go to UniProtKB: Q9CR61
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UniProt Group	Q9CR61
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Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	PA [auth p]	176	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9DCS9 (Mus musculus) Explore Q9DCS9 Go to UniProtKB: Q9DCS9
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UniProt Group	Q9DCS9
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Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	QA [auth q]	145	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q7TMF3 (Mus musculus) Explore Q7TMF3 Go to UniProtKB: Q7TMF3
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UniProt Group	Q7TMF3
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Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7	RA [auth r]	113	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Z1P6 (Mus musculus) Explore Q9Z1P6 Go to UniProtKB: Q9Z1P6
IMPC: MGI:1913666
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UniProt Group	Q9Z1P6
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Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details	Image
NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial	SA [auth s]	104	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q8BK30 (Mus musculus) Explore Q8BK30 Go to UniProtKB: Q8BK30
IMPC: MGI:1890894
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UniProt Group	Q8BK30
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Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 1, mitochondrial	EB [auth Aa], TA [auth AA]	480	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q9CZ13 (Mus musculus) Explore Q9CZ13 Go to UniProtKB: Q9CZ13
IMPC: MGI:107876
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UniProt Group	Q9CZ13
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Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 2, mitochondrial	FB [auth Ab], UA [auth AB]	453	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9DB77 (Mus musculus) Explore Q9DB77 Go to UniProtKB: Q9DB77
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UniProt Group	Q9DB77
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Reference Sequence

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Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b	GB [auth Ac], VA [auth AC]	381	Mus musculus	Mutation(s): 0
UniProt
Find proteins for P00158 (Mus musculus) Explore P00158 Go to UniProtKB: P00158
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UniProt Group	P00158
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Reference Sequence

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Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome c1, heme protein, mitochondrial	HB [auth Ad], WA [auth AD]	325	Mus musculus	Mutation(s): 0 EC: 7.1.1.8
UniProt & NIH Common Fund Data Resources
Find proteins for Q9D0M3 (Mus musculus) Explore Q9D0M3 Go to UniProtKB: Q9D0M3
IMPC: MGI:1913695
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UniProt Group	Q9D0M3
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Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit Rieske, mitochondrial	BB [auth AI], IB [auth Ae], XA [auth AE]	274	Mus musculus	Mutation(s): 0 EC: 7.1.1.8
UniProt
Find proteins for Q9CR68 (Mus musculus) Explore Q9CR68 Go to UniProtKB: Q9CR68
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UniProt Group	Q9CR68
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Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 7	JB [auth Af], YA [auth AF]	111	Mus musculus	Mutation(s): 0
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Find proteins for Q9CQB4 (Mus musculus) Explore Q9CQB4 Go to UniProtKB: Q9CQB4
IMPC: MGI:1914780
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UniProt Group	Q9CQB4
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Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 8	KB [auth Ag], ZA [auth AG]	82	Mus musculus	Mutation(s): 0
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Find proteins for Q9CQ69 (Mus musculus) Explore Q9CQ69 Go to UniProtKB: Q9CQ69
IMPC: MGI:107807
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UniProt Group	Q9CQ69
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Reference Sequence

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Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 6, mitochondrial	AB [auth AH], LB [auth Ah]	89	Mus musculus	Mutation(s): 0
UniProt
Find proteins for P99028 (Mus musculus) Explore P99028 Go to UniProtKB: P99028
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UniProt Group	P99028
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Reference Sequence

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Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 9	CB [auth AJ], MB [auth Aj]	64	Mus musculus	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q8R1I1 (Mus musculus) Explore Q8R1I1 Go to UniProtKB: Q8R1I1
IMPC: MGI:1913402
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UniProt Group	Q8R1I1
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Reference Sequence

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Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details	Image
Cytochrome b-c1 complex subunit 10	DB [auth AK], NB [auth Ak]	56	Mus musculus	Mutation(s): 0
UniProt
Find proteins for Q9CPX8 (Mus musculus) Explore Q9CPX8 Go to UniProtKB: Q9CPX8
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UniProt Group	Q9CPX8
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Reference Sequence

Small Molecules

Ligands 16 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CDL (Subject of Investigation/LOI) Query on CDL Download Ideal Coordinates CCD File SDF format, chain CD [auth Aa] SDF format, chain HC [auth L] SDF format, chain KD [auth Ag] SDF format, chain LD [auth Ag] SDF format, chain MC [auth M] SDF format, chain RC [auth Y] SDF format, chain SC [auth d] SDF format, chain TC [auth h] SDF format, chain XC [auth q] MOL2 format, chain CD [auth Aa] MOL2 format, chain HC [auth L] MOL2 format, chain KD [auth Ag] MOL2 format, chain LD [auth Ag] MOL2 format, chain MC [auth M] MOL2 format, chain RC [auth Y] MOL2 format, chain SC [auth d] MOL2 format, chain TC [auth h] MOL2 format, chain XC [auth q] mmCIF format, chain CD [auth Aa] mmCIF format, chain HC [auth L] mmCIF format, chain KD [auth Ag] mmCIF format, chain LD [auth Ag] mmCIF format, chain MC [auth M] mmCIF format, chain RC [auth Y] mmCIF format, chain SC [auth d] mmCIF format, chain TC [auth h] mmCIF format, chain XC [auth q]	CD [auth Aa] HC [auth L] KD [auth Ag] LD [auth Ag] MC [auth M] CD [auth Aa], HC [auth L], KD [auth Ag], LD [auth Ag], MC [auth M], RC [auth Y], SC [auth d], TC [auth h], XC [auth q]	CARDIOLIPIN C₈₁ H₁₅₆ O₁₇ P₂ XVTUQDWPJJBEHJ-KZCWQMDCSA-L		Interactions Focus chain CD [auth Aa] Focus chain HC [auth L] Focus chain KD [auth Ag] Focus chain LD [auth Ag] Focus chain MC [auth M] Focus chain RC [auth Y] Focus chain SC [auth d] Focus chain TC [auth h] Focus chain XC [auth q] Interactions & Density Focus chain CD [auth Aa] Focus chain HC [auth L] Focus chain KD [auth Ag] Focus chain LD [auth Ag] Focus chain MC [auth M] Focus chain RC [auth Y] Focus chain SC [auth d] Focus chain TC [auth h] Focus chain XC [auth q]
U10 (Subject of Investigation/LOI) Query on U10 Download Ideal Coordinates CCD File SDF format, chain HD [auth Ac] MOL2 format, chain HD [auth Ac] mmCIF format, chain HD [auth Ac]	HD [auth Ac]	UBIQUINONE-10 C₅₉ H₉₀ O₄ ACTIUHUUMQJHFO-UPTCCGCDSA-N		Interactions Focus chain HD [auth Ac] Interactions & Density Focus chain HD [auth Ac]
UQ9 (Subject of Investigation/LOI) Query on UQ9 Download Ideal Coordinates CCD File SDF format, chain YB [auth H] MOL2 format, chain YB [auth H] mmCIF format, chain YB [auth H]	YB [auth H]	Ubiquinone-9 C₅₄ H₈₂ O₄ UUGXJSBPSRROMU-YJKFELPISA-N		Interactions Focus chain YB [auth H] Interactions & Density Focus chain YB [auth H]
PC1 (Subject of Investigation/LOI) Query on PC1 Download Ideal Coordinates CCD File SDF format, chain BC [auth I] SDF format, chain QB [auth B] MOL2 format, chain BC [auth I] MOL2 format, chain QB [auth B] mmCIF format, chain BC [auth I] mmCIF format, chain QB [auth B]	BC [auth I], QB [auth B]	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE C₄₄ H₈₈ N O₈ P NRJAVPSFFCBXDT-HUESYALOSA-N		Interactions Focus chain BC [auth I] Focus chain QB [auth B] Interactions & Density Focus chain BC [auth I] Focus chain QB [auth B]
3PE (Subject of Investigation/LOI) Query on 3PE Download Ideal Coordinates CCD File SDF format, chain AC [auth H] SDF format, chain DD [auth Ac] SDF format, chain EC [auth J] SDF format, chain FC [auth L] SDF format, chain GC [auth L] SDF format, chain GD [auth Ac] SDF format, chain JC [auth L] SDF format, chain KC [auth M] SDF format, chain LC [auth M] SDF format, chain MD [auth Ag] SDF format, chain RB [auth D] SDF format, chain UC [auth i] SDF format, chain VC [auth m] SDF format, chain ZB [auth H] MOL2 format, chain AC [auth H] MOL2 format, chain DD [auth Ac] MOL2 format, chain EC [auth J] MOL2 format, chain FC [auth L] MOL2 format, chain GC [auth L] MOL2 format, chain GD [auth Ac] MOL2 format, chain JC [auth L] MOL2 format, chain KC [auth M] MOL2 format, chain LC [auth M] MOL2 format, chain MD [auth Ag] MOL2 format, chain RB [auth D] MOL2 format, chain UC [auth i] MOL2 format, chain VC [auth m] MOL2 format, chain ZB [auth H] mmCIF format, chain AC [auth H] mmCIF format, chain DD [auth Ac] mmCIF format, chain EC [auth J] mmCIF format, chain FC [auth L] mmCIF format, chain GC [auth L] mmCIF format, chain GD [auth Ac] mmCIF format, chain JC [auth L] mmCIF format, chain KC [auth M] mmCIF format, chain LC [auth M] mmCIF format, chain MD [auth Ag] mmCIF format, chain RB [auth D] mmCIF format, chain UC [auth i] mmCIF format, chain VC [auth m] mmCIF format, chain ZB [auth H]	AC [auth H] DD [auth Ac] EC [auth J] FC [auth L] GC [auth L] AC [auth H], DD [auth Ac], EC [auth J], FC [auth L], GC [auth L], GD [auth Ac], JC [auth L], KC [auth M], LC [auth M], MD [auth Ag], RB [auth D], UC [auth i], VC [auth m], ZB [auth H]	1,2-Distearoyl-sn-glycerophosphoethanolamine C₄₁ H₈₂ N O₈ P LVNGJLRDBYCPGB-LDLOPFEMSA-N		Interactions Focus chain AC [auth H] Focus chain DD [auth Ac] Focus chain EC [auth J] Focus chain FC [auth L] Focus chain GC [auth L] Focus chain GD [auth Ac] Focus chain JC [auth L] Focus chain KC [auth M] Focus chain LC [auth M] Focus chain MD [auth Ag] Focus chain RB [auth D] Focus chain UC [auth i] Focus chain VC [auth m] Focus chain ZB [auth H] Interactions & Density Focus chain AC [auth H] Focus chain DD [auth Ac] Focus chain EC [auth J] Focus chain FC [auth L] Focus chain GC [auth L] Focus chain GD [auth Ac] Focus chain JC [auth L] Focus chain KC [auth M] Focus chain LC [auth M] Focus chain MD [auth Ag] Focus chain RB [auth D] Focus chain UC [auth i] Focus chain VC [auth m] Focus chain ZB [auth H]
NDP (Subject of Investigation/LOI) Query on NDP Download Ideal Coordinates CCD File SDF format, chain OC [auth P] MOL2 format, chain OC [auth P] mmCIF format, chain OC [auth P]	OC [auth P]	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C₂₁ H₃₀ N₇ O₁₇ P₃ ACFIXJIJDZMPPO-NNYOXOHSSA-N		Interactions Focus chain OC [auth P] Interactions & Density Focus chain OC [auth P]
HEC (Subject of Investigation/LOI) Query on HEC Download Ideal Coordinates CCD File SDF format, chain BD [auth AD] SDF format, chain JD [auth Ad] MOL2 format, chain BD [auth AD] MOL2 format, chain JD [auth Ad] mmCIF format, chain BD [auth AD] mmCIF format, chain JD [auth Ad]	BD [auth AD], JD [auth Ad]	HEME C C₃₄ H₃₄ Fe N₄ O₄ HXQIYSLZKNYNMH-LJNAALQVSA-N		Interactions Focus chain BD [auth AD] Focus chain JD [auth Ad] Interactions & Density Focus chain BD [auth AD] Focus chain JD [auth Ad]
HEM (Subject of Investigation/LOI) Query on HEM Download Ideal Coordinates CCD File SDF format, chain ED [auth Ac] SDF format, chain FD [auth Ac] SDF format, chain YC [auth AC] SDF format, chain ZC [auth AC] MOL2 format, chain ED [auth Ac] MOL2 format, chain FD [auth Ac] MOL2 format, chain YC [auth AC] MOL2 format, chain ZC [auth AC] mmCIF format, chain ED [auth Ac] mmCIF format, chain FD [auth Ac] mmCIF format, chain YC [auth AC] mmCIF format, chain ZC [auth AC]	ED [auth Ac], FD [auth Ac], YC [auth AC], ZC [auth AC]	PROTOPORPHYRIN IX CONTAINING FE C₃₄ H₃₂ Fe N₄ O₄ KABFMIBPWCXCRK-RGGAHWMASA-L		Interactions Focus chain ED [auth Ac] Focus chain FD [auth Ac] Focus chain YC [auth AC] Focus chain ZC [auth AC] Interactions & Density Focus chain ED [auth Ac] Focus chain FD [auth Ac] Focus chain YC [auth AC] Focus chain ZC [auth AC]
UQ6 (Subject of Investigation/LOI) Query on UQ6 Download Ideal Coordinates CCD File SDF format, chain AD [auth AC] SDF format, chain ID [auth Ac] MOL2 format, chain AD [auth AC] MOL2 format, chain ID [auth Ac] mmCIF format, chain AD [auth AC] mmCIF format, chain ID [auth Ac]	AD [auth AC], ID [auth Ac]	5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL C₃₉ H₆₀ O₄ DYOSCPIQEYRQEO-XQCASOQKSA-N		Interactions Focus chain AD [auth AC] Focus chain ID [auth Ac] Interactions & Density Focus chain AD [auth AC] Focus chain ID [auth Ac]
EHZ (Subject of Investigation/LOI) Query on EHZ Download Ideal Coordinates CCD File SDF format, chain QC [auth W] SDF format, chain WC [auth n] MOL2 format, chain QC [auth W] MOL2 format, chain WC [auth n] mmCIF format, chain QC [auth W] mmCIF format, chain WC [auth n]	QC [auth W], WC [auth n]	~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate C₂₅ H₄₉ N₂ O₉ P S JYSKQPQRUCZFIQ-REWPJTCUSA-N		Interactions Focus chain QC [auth W] Focus chain WC [auth n] Interactions & Density Focus chain QC [auth W] Focus chain WC [auth n]
FMN (Subject of Investigation/LOI) Query on FMN Download Ideal Coordinates CCD File SDF format, chain TB [auth F] MOL2 format, chain TB [auth F] mmCIF format, chain TB [auth F]	TB [auth F]	FLAVIN MONONUCLEOTIDE C₁₇ H₂₁ N₄ O₉ P FVTCRASFADXXNN-SCRDCRAPSA-N		Interactions Focus chain TB [auth F] Interactions & Density Focus chain TB [auth F]
ADP (Subject of Investigation/LOI) Query on ADP Download Ideal Coordinates CCD File SDF format, chain NC [auth O] MOL2 format, chain NC [auth O] mmCIF format, chain NC [auth O]	NC [auth O]	ADENOSINE-5'-DIPHOSPHATE C₁₀ H₁₅ N₅ O₁₀ P₂ XTWYTFMLZFPYCI-KQYNXXCUSA-N		Interactions Focus chain NC [auth O] Interactions & Density Focus chain NC [auth O]
SF4 (Subject of Investigation/LOI) Query on SF4 Download Ideal Coordinates CCD File SDF format, chain CC [auth I] SDF format, chain DC [auth I] SDF format, chain OB [auth B] SDF format, chain UB [auth F] SDF format, chain VB [auth G] SDF format, chain WB [auth G] MOL2 format, chain CC [auth I] MOL2 format, chain DC [auth I] MOL2 format, chain OB [auth B] MOL2 format, chain UB [auth F] MOL2 format, chain VB [auth G] MOL2 format, chain WB [auth G] mmCIF format, chain CC [auth I] mmCIF format, chain DC [auth I] mmCIF format, chain OB [auth B] mmCIF format, chain UB [auth F] mmCIF format, chain VB [auth G] mmCIF format, chain WB [auth G]	CC [auth I] DC [auth I] OB [auth B] UB [auth F] VB [auth G] CC [auth I], DC [auth I], OB [auth B], UB [auth F], VB [auth G], WB [auth G]	IRON/SULFUR CLUSTER Fe₄ S₄ LJBDFODJNLIPKO-UHFFFAOYSA-N		Interactions Focus chain CC [auth I] Focus chain DC [auth I] Focus chain OB [auth B] Focus chain UB [auth F] Focus chain VB [auth G] Focus chain WB [auth G] Interactions & Density Focus chain CC [auth I] Focus chain DC [auth I] Focus chain OB [auth B] Focus chain UB [auth F] Focus chain VB [auth G] Focus chain WB [auth G]
UQ1 (Subject of Investigation/LOI) Query on UQ1 Download Ideal Coordinates CCD File SDF format, chain PB [auth B] MOL2 format, chain PB [auth B] mmCIF format, chain PB [auth B]	PB [auth B]	UBIQUINONE-1 C₁₄ H₁₈ O₄ SOECUQMRSRVZQQ-UHFFFAOYSA-N		Interactions Focus chain PB [auth B] Interactions & Density Focus chain PB [auth B]
FES (Subject of Investigation/LOI) Query on FES Download Ideal Coordinates CCD File SDF format, chain SB [auth E] SDF format, chain XB [auth G] MOL2 format, chain SB [auth E] MOL2 format, chain XB [auth G] mmCIF format, chain SB [auth E] mmCIF format, chain XB [auth G]	SB [auth E], XB [auth G]	FE2/S2 (INORGANIC) CLUSTER Fe₂ S₂ NIXDOXVAJZFRNF-UHFFFAOYSA-N		Interactions Focus chain SB [auth E] Focus chain XB [auth G] Interactions & Density Focus chain SB [auth E] Focus chain XB [auth G]
ZN (Subject of Investigation/LOI) Query on ZN Download Ideal Coordinates CCD File SDF format, chain IC [auth L] SDF format, chain PC [auth R] MOL2 format, chain IC [auth L] MOL2 format, chain PC [auth R] mmCIF format, chain IC [auth L] mmCIF format, chain PC [auth R]	IC [auth L], PC [auth R]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain IC [auth L] Focus chain PC [auth R] Interactions & Density Focus chain IC [auth L] Focus chain PC [auth R]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 6.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-09-18

Deposition Author(s):

Shin, Y.-C.

Liao, M.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)	United States	RO1 DK081418
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)	United States	RO1 DK089883

Revision History (Full details and data files)

Version 1.0: 2024-09-18
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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8IC2

Respiratory complex CI:CIII2, type I, PERK -/- mouse under cold temperature

Respiratory complex CI:CIII2, type I, PERK -/- mouse under cold temperature

Entity ID: 1

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Entity ID: 2

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Entity ID: 8

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Entity ID: 9

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Entity ID: 10

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Entity ID: 11

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Entity ID: 12

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Entity ID: 13

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Entity ID: 14

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Entity ID: 15

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Entity ID: 16

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Entity ID: 17

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Entity ID: 18

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Entity ID: 19