8IAO | pdb_00008iao

Respiratory complex CI:CIII2, type I, Wild type mouse under thermoneutral temperature

  • Classification: ELECTRON TRANSPORT
  • Organism(s): Mus musculus
  • Mutation(s): No 
  • Membrane Protein: Yes  mpstruc

  • Deposited: 2023-02-09 Released: 2024-09-18 
  • Deposition Author(s): Shin, Y.-C., Liao, M.
  • Funding Organization(s): National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 8IAO

This is version 1.3 of the entry. See complete history

Literature

Structural basis of respiratory complex adaptation to cold temperatures.

Shin, Y.C.Latorre-Muro, P.Djurabekova, A.Zdorevskyi, O.Bennett, C.F.Burger, N.Song, K.Xu, C.Paulo, J.A.Gygi, S.P.Sharma, V.Liao, M.Puigserver, P.

(2024) Cell 187: 6584

  • DOI: https://doi.org/10.1016/j.cell.2024.09.029
  • Primary Citation Related Structures: 
    8IAO, 8IAP, 8IAQ, 8IAR, 8IB4, 8IB5, 8IB6, 8IB7, 8IB9, 8IBA, 8IBB, 8IBC, 8IBD, 8IBE, 8IBF, 8IBG, 8IC2, 8IC3, 8IC4, 8IC5, 8XNL, 8XNM, 8XNN, 8XNO, 8XNP, 8XNQ, 8XNR, 8XNS, 8XNT, 8XNU, 8XNV, 8XNW, 8XNX, 8XNY, 8XNZ, 8XO0

  • PubMed Abstract: 

    In response to cold, mammals activate brown fat for respiratory-dependent thermogenesis reliant on the electron transport chain. Yet, the structural basis of respiratory complex adaptation upon cold exposure remains elusive. Herein, we combined thermoregulatory physiology and cryoelectron microscopy (cryo-EM) to study endogenous respiratory supercomplexes from mice exposed to different temperatures. A cold-induced conformation of CI:III 2 (termed type 2) supercomplex was identified with a ∼25° rotation of CIII 2 around its inter-dimer axis, shortening inter-complex Q exchange space, and exhibiting catalytic states that favor electron transfer. Large-scale supercomplex simulations in mitochondrial membranes reveal how lipid-protein arrangements stabilize type 2 complexes to enhance catalytic activity. Together, our cryo-EM studies, multiscale simulations, and biochemical analyses unveil the thermoregulatory mechanisms and dynamics of increased respiratory capacity in brown fat at the structural and energetic level.


  • Organizational Affiliation
    • Department of Chemical Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China; Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.

Macromolecule Content 

  • Total Structure Weight: 1,667.31 kDa 
  • Atom Count: 98,999 
  • Modeled Residue Count: 12,083 
  • Deposited Residue Count: 14,392 
  • Unique protein chains: 54

Macromolecules

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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 3115Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for P03899 (Mus musculus)
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial224Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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IMPC:  MGI:1922656
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial263Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for Q9DCT2 (Mus musculus)
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IMPC:  MGI:1915599
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Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial463Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for Q91WD5 (Mus musculus)
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IMPC:  MGI:2385112
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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial248Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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IMPC:  MGI:1920150
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial464Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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IMPC:  MGI:107851
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Entity ID: 7
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial727Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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IMPC:  MGI:2443241
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Entity ID: 8
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 1318Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
UniProt
Find proteins for P03888 (Mus musculus)
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Entity ID: 9
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial212Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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IMPC:  MGI:2385079
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Entity ID: 10
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 6172Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for P03925 (Mus musculus)
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Entity ID: 11
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 4L98Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for P03903 (Mus musculus)
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Entity ID: 12
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 5607Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for P03921 (Mus musculus)
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Entity ID: 13
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 4459Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for P03911 (Mus musculus)
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Entity ID: 14
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH-ubiquinone oxidoreductase chain 2345Mus musculusMutation(s): 0 
EC: 7.1.1.2
Membrane Entity: Yes 
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Find proteins for P03893 (Mus musculus)
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Entity ID: 15
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial355Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1914523
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Entity ID: 16
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial377Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1913358
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Entity ID: 17
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial175Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CXZ1 (Mus musculus)
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Entity ID: 18
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial116Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:107932
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Entity ID: 19
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 299Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CQ75 (Mus musculus)
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Entity ID: 20
MoleculeChains  Sequence LengthOrganismDetailsImage
Acyl carrier protein, mitochondrial
T, U
156Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CR21 (Mus musculus)
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Entity ID: 21
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5116Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q9CPP6 (Mus musculus)
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Entity ID: 22
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6131Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1914380
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Entity ID: 23
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8172Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1915625
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Entity ID: 24
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11143Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1917125
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Entity ID: 25
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13144Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q9ERS2 (Mus musculus)
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Entity ID: 26
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1AA [auth a]70Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for O35683 (Mus musculus)
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Entity ID: 27
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3BA [auth b]84Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CQ91 (Mus musculus)
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Entity ID: 28
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrialCA [auth c]76Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CQY9 (Mus musculus)
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Entity ID: 29
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 subunit C2DA [auth d]120Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CQ54 (Mus musculus)
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Entity ID: 30
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5EA [auth e]106Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q99LY9 (Mus musculus)
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IMPC:  MGI:1890889
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Entity ID: 31
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1FA [auth f]57Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for P0DN34 (Mus musculus)
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Entity ID: 32
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrialGA [auth g]151Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for O09111 (Mus musculus)
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Entity ID: 33
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrialHA [auth h]189Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1913296
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Entity ID: 34
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6IA [auth i]128Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q3UIU2 (Mus musculus)
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Entity ID: 35
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrialJA [auth j]105Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CPU2 (Mus musculus)
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Entity ID: 36
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3KA [auth k]104Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1913745
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Entity ID: 37
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialLA [auth l]186Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1914514
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Entity ID: 38
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4MA [auth m]129Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 39
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9NA [auth n]179Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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IMPC:  MGI:1913468
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Entity ID: 40
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7OA [auth o]137Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CR61 (Mus musculus)
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Entity ID: 41
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10PA [auth p]176Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9DCS9 (Mus musculus)
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Entity ID: 42
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12QA [auth q]145Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q7TMF3 (Mus musculus)
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Reference Sequence
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Entity ID: 43
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7RA [auth r]113Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9Z1P6 (Mus musculus)
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IMPC:  MGI:1913666
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Reference Sequence
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Entity ID: 44
MoleculeChains  Sequence LengthOrganismDetailsImage
NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrialSA [auth s]104Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q8BK30 (Mus musculus)
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IMPC:  MGI:1890894
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Reference Sequence
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Entity ID: 45
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 1, mitochondrialEB [auth Aa],
TA [auth AA]
480Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CZ13 (Mus musculus)
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IMPC:  MGI:107876
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Reference Sequence
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Entity ID: 46
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 2, mitochondrialFB [auth Ab],
UA [auth AB]
453Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q9DB77 (Mus musculus)
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Reference Sequence
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Entity ID: 47
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome bGB [auth Ac],
VA [auth AC]
381Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for P00158 (Mus musculus)
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Reference Sequence
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Entity ID: 48
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome c1, heme protein, mitochondrialHB [auth Ad],
WA [auth AD]
325Mus musculusMutation(s): 0 
EC: 7.1.1.8
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q9D0M3 (Mus musculus)
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IMPC:  MGI:1913695
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UniProt GroupQ9D0M3
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Reference Sequence
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Entity ID: 49
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit Rieske, mitochondrialBB [auth AI],
IB [auth Ae],
MB [auth Ai],
XA [auth AE]
274Mus musculusMutation(s): 0 
EC: 7.1.1.8
Membrane Entity: Yes 
UniProt
Find proteins for Q9CR68 (Mus musculus)
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Reference Sequence
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Entity ID: 50
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 7JB [auth Af],
YA [auth AF]
111Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q9CQB4 (Mus musculus)
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IMPC:  MGI:1914780
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Reference Sequence
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Entity ID: 51
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 8KB [auth Ag],
ZA [auth AG]
82Mus musculusMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9CQ69 (Mus musculus)
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IMPC:  MGI:107807
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Entity ID: 52
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 6, mitochondrialAB [auth AH],
LB [auth Ah]
89Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P99028 (Mus musculus)
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IMPC:  MGI:1913826
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Reference Sequence
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Entity ID: 53
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 9CB [auth AJ],
NB [auth Aj]
64Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q8R1I1 (Mus musculus)
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IMPC:  MGI:1913402
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Entity ID: 54
MoleculeChains  Sequence LengthOrganismDetailsImage
Cytochrome b-c1 complex subunit 10DB [auth AK],
OB [auth Ak]
56Mus musculusMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for Q9CPX8 (Mus musculus)
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Reference Sequence

Small Molecules

Ligands 16 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
CDL
(Subject of Investigation/LOI)

Query on CDL



Download:Ideal Coordinates CCD File
AD [auth q]
HC [auth L]
JD [auth AG]
KD [auth AG]
LC [auth M]
AD [auth q],
HC [auth L],
JD [auth AG],
KD [auth AG],
LC [auth M],
ND [auth Aa],
QB [auth A],
RC [auth Y],
TC [auth d],
UC [auth h],
VD [auth Ag],
WD [auth Ag]
CARDIOLIPIN
C81 H156 O17 P2
XVTUQDWPJJBEHJ-KZCWQMDCSA-L
U10
(Subject of Investigation/LOI)

Query on U10



Download:Ideal Coordinates CCD File
GD [auth AC],
RD [auth Ac]
UBIQUINONE-10
C59 H90 O4
ACTIUHUUMQJHFO-UPTCCGCDSA-N
UQ9
(Subject of Investigation/LOI)

Query on UQ9



Download:Ideal Coordinates CCD File
ZB [auth H]Ubiquinone-9
C54 H82 O4
UUGXJSBPSRROMU-YJKFELPISA-N
PC1
(Subject of Investigation/LOI)

Query on PC1



Download:Ideal Coordinates CCD File
BC [auth I],
BD [auth q],
FC [auth L],
UD [auth Ae],
WC [auth l]
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
C44 H88 N O8 P
NRJAVPSFFCBXDT-HUESYALOSA-N
3PE
(Subject of Investigation/LOI)

Query on 3PE



Download:Ideal Coordinates CCD File
AC [auth H]
CD [auth AC]
EC [auth J]
FD [auth AC]
GC [auth L]
AC [auth H],
CD [auth AC],
EC [auth J],
FD [auth AC],
GC [auth L],
IC [auth L],
JC [auth M],
KC [auth M],
LD [auth AG],
MD [auth Aa],
PB [auth A],
QC [auth Y],
QD [auth Ac],
SC [auth b],
VC [auth i],
XC [auth m],
XD [auth Ag],
YC [auth m]
1,2-Distearoyl-sn-glycerophosphoethanolamine
C41 H82 N O8 P
LVNGJLRDBYCPGB-LDLOPFEMSA-N
NDP
(Subject of Investigation/LOI)

Query on NDP



Download:Ideal Coordinates CCD File
NC [auth P]NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
HEC
(Subject of Investigation/LOI)

Query on HEC



Download:Ideal Coordinates CCD File
ID [auth AD],
TD [auth Ad]
HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
HEM
(Subject of Investigation/LOI)

Query on HEM



Download:Ideal Coordinates CCD File
DD [auth AC],
ED [auth AC],
OD [auth Ac],
PD [auth Ac]
PROTOPORPHYRIN IX CONTAINING FE
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
UQ6
(Subject of Investigation/LOI)

Query on UQ6



Download:Ideal Coordinates CCD File
HD [auth AC],
SD [auth Ac]
5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL
C39 H60 O4
DYOSCPIQEYRQEO-XQCASOQKSA-N
EHZ
(Subject of Investigation/LOI)

Query on EHZ



Download:Ideal Coordinates CCD File
PC [auth W],
ZC [auth n]
~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate
C25 H49 N2 O9 P S
JYSKQPQRUCZFIQ-REWPJTCUSA-N
FMN
(Subject of Investigation/LOI)

Query on FMN



Download:Ideal Coordinates CCD File
UB [auth F]FLAVIN MONONUCLEOTIDE
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
ADP
(Subject of Investigation/LOI)

Query on ADP



Download:Ideal Coordinates CCD File
MC [auth O]ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SF4
(Subject of Investigation/LOI)

Query on SF4



Download:Ideal Coordinates CCD File
CC [auth I]
DC [auth I]
RB [auth B]
VB [auth F]
WB [auth G]
CC [auth I],
DC [auth I],
RB [auth B],
VB [auth F],
WB [auth G],
XB [auth G]
IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-UHFFFAOYSA-N
UQ1
(Subject of Investigation/LOI)

Query on UQ1



Download:Ideal Coordinates CCD File
SB [auth D]UBIQUINONE-1
C14 H18 O4
SOECUQMRSRVZQQ-UHFFFAOYSA-N
FES
(Subject of Investigation/LOI)

Query on FES



Download:Ideal Coordinates CCD File
TB [auth E],
YB [auth G]
FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
ZN

Query on ZN



Download:Ideal Coordinates CCD File
OC [auth R]ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)United StatesRO1 DK081418
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)United StatesRO1 DK089883

Revision History  (Full details and data files)

  • Version 1.0: 2024-09-18
    Type: Initial release
  • Version 1.1: 2024-10-09
    Changes: Data collection, Structure summary
  • Version 1.2: 2024-10-30
    Changes: Data collection, Database references
  • Version 1.3: 2024-12-04
    Changes: Data collection, Database references