7XW6

TSHR-Gs-M22 antibody-ML109 complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.78 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Hormone- and antibody-mediated activation of the thyrotropin receptor.

Duan, J.Xu, P.Luan, X.Ji, Y.He, X.Song, N.Yuan, Q.Jin, Y.Cheng, X.Jiang, H.Zheng, J.Zhang, S.Jiang, Y.Xu, H.E.

(2022) Nature 609: 854-859

  • DOI: https://doi.org/10.1038/s41586-022-05173-3
  • Primary Citation of Related Structures:  
    7XW5, 7XW6, 7XW7

  • PubMed Abstract: 

    Thyroid-stimulating hormone (TSH), through activation of its G-protein-coupled thyrotropin receptor (TSHR), controls the synthesis of thyroid hormone-an essential metabolic hormone 1-3 . Aberrant signalling of TSHR by autoantibodies causes Graves' disease (hyperthyroidism) and hypothyroidism, both of which affect millions of patients worldwide 4 . Here we report the active structures of TSHR with TSH and the activating autoantibody M22 5 , both bound to the allosteric agonist ML-109 6 , as well as an inactivated TSHR structure with the inhibitory antibody K1-70 7 . Both TSH and M22 push the extracellular domain (ECD) of TSHR into an upright active conformation. By contrast, K1-70 blocks TSH binding and cannot push the ECD into the upright conformation. Comparisons of the active and inactivated structures of TSHR with those of the luteinizing hormone/choriogonadotropin receptor (LHCGR) reveal a universal activation mechanism of glycoprotein hormone receptors, in which a conserved ten-residue fragment (P10) from the hinge C-terminal loop mediates ECD interactions with the TSHR transmembrane domain 8 . One notable feature is that there are more than 15 cholesterols surrounding TSHR, supporting its preferential location in lipid rafts 9 . These structures also highlight a similar ECD-push mechanism for TSH and autoantibody M22 to activate TSHR, therefore providing the molecular basis for Graves' disease.


  • Organizational Affiliation

    The CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short249Homo sapiensMutation(s): 0 
EC: 3.6.5
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P63092 (Homo sapiens)
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Go to UniProtKB:  P63092
PHAROS:  P63092
GTEx:  ENSG00000087460 
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UniProt GroupP63092
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1350Homo sapiensMutation(s): 0 
Gene Names: GNB1
UniProt & NIH Common Fund Data Resources
Find proteins for P62873 (Homo sapiens)
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Go to UniProtKB:  P62873
PHAROS:  P62873
GTEx:  ENSG00000078369 
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UniProt GroupP62873
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2C [auth G]71Homo sapiensMutation(s): 0 
Gene Names: GNG2
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for P59768 (Homo sapiens)
Explore P59768 
Go to UniProtKB:  P59768
PHAROS:  P59768
GTEx:  ENSG00000186469 
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UniProt GroupP59768
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
M22 antibody light chainD [auth L]112Mus musculusMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Nanobody35E [auth N]134Homo sapiensMutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Thyrotropin receptorF [auth R]702Homo sapiensMutation(s): 1 
Gene Names: TSHRLGR3
Membrane Entity: Yes 
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Find proteins for P16473 (Homo sapiens)
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PHAROS:  P16473
GTEx:  ENSG00000165409 
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UniProt GroupP16473
Glycosylation
Glycosylation Sites: 4Go to GlyGen: P16473-1
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
M22 antibody heavy chainG [auth Y]120Homo sapiensMutation(s): 0 
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Small Molecules
Ligands 4 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
HOI (Subject of Investigation/LOI)
Query on HOI

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HA [auth R]~{N}-[4-[[2-methoxy-5-[(2~{S})-5-oxidanyl-4-oxidanylidene-3-(phenylmethyl)-1,2-dihydroquinazolin-2-yl]phenyl]methoxy]phenyl]ethanamide
C31 H29 N3 O5
JRVXFGNCHKHBPA-PMERELPUSA-N
CLR
Query on CLR

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AA [auth R]
BA [auth R]
L [auth R]
M [auth R]
N [auth R]
AA [auth R],
BA [auth R],
L [auth R],
M [auth R],
N [auth R],
O [auth R],
P [auth R],
Q [auth R],
R,
S [auth R],
T [auth R],
U [auth R],
V [auth R],
W [auth R],
X [auth R],
Y [auth R],
Z [auth R]
CHOLESTEROL
C27 H46 O
HVYWMOMLDIMFJA-DPAQBDIFSA-N
PLM
Query on PLM

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CA [auth R],
DA [auth R],
EA [auth R],
FA [auth R],
GA [auth R]
PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
NAG
Query on NAG

Download Ideal Coordinates CCD File 
H [auth R],
I [auth R],
J [auth R],
K [auth R]
2-acetamido-2-deoxy-beta-D-glucopyranose
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.78 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China32130022

Revision History  (Full details and data files)

  • Version 1.0: 2022-08-17
    Type: Initial release
  • Version 1.1: 2022-08-24
    Changes: Database references
  • Version 1.2: 2022-10-05
    Changes: Database references
  • Version 1.3: 2024-10-09
    Changes: Data collection, Structure summary