Structural characterization of human neutralizing antibodies against JC and BK polyomavirus
Harprecht, C., Stroeh, L.J., Senn, L., O'Hara, B.A., Nagel, F., Freytag, J., Stiehrof, Y.D., Atwood, W.J., Combaluzier, B., Stehle, T.To be published.
Experimental Data Snapshot
Starting Models: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
scFv 29B1 | 252 | Homo sapiens | Mutation(s): 0 | ||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Major capsid protein VP1 | 272 | JC polyomavirus | Mutation(s): 0 | ||
UniProt | |||||
Find proteins for P03089 (JC polyomavirus) Explore P03089 Go to UniProtKB: P03089 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03089 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 124.127 | α = 90 |
b = 172.53 | β = 104.527 |
c = 159.71 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
German Research Foundation (DFG) | Germany | FOR2327 |