B19 Parvovirus Non-structural protein 1 in complex with zinc
Tewary, S.K.To be published.
Experimental Data Snapshot
Starting Model: other
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltodextrin-binding protein | 371 | Escherichia coli | Mutation(s): 0  Gene Names: malE | ||
UniProt | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AEX9 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Non-structural protein NS1 | 171 | Human parvovirus B19 | Mutation(s): 0  Gene Names: NS | ||
UniProt | |||||
Find proteins for Q6TV13 (Human parvovirus B19) Explore Q6TV13  Go to UniProtKB:  Q6TV13 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6TV13 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN (Subject of Investigation/LOI) Query on ZN | D [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Entity ID: 3 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900001 Query on PRD_900001 | C | alpha-maltose | Oligosaccharide / Nutrient |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 102.69 | α = 90 |
b = 102.69 | β = 90 |
c = 134.21 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
xia2 | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |