5F2H | pdb_00005f2h

2.75 Angstrom resolution crystal structure of uncharacterized protein from Bacillus cereus ATCC 10987

• PDB DOI: https://doi.org/10.2210/pdb5F2H/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Bacillus cereus ATCC 10987
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2015-12-01 Released: 2015-12-16 
• Deposition Author(s): Halavaty, A.S., Filippova, E.V., Wawrzak, Z., Minasov, G., Kiryukhina, O., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.75 Å
• R-Value Free: 
  0.291 (Depositor), 0.291 (DCC) 
• R-Value Work: 
  0.230 (Depositor), 0.230 (DCC) 
• R-Value Observed: 
  0.233 (Depositor) 

Literature

2.75 Angstrom resolution crystal structure of uncharacterized protein from Bacillus cereus ATCC 10987

Halavaty, A.S., Filippova, E.V., Wawrzak, Z., Minasov, G., Kiryukhina, O., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 74.94 kDa 
• Atom Count: 5,071 
• Modeled Residue Count: 612 
• Deposited Residue Count: 634 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B	317	Bacillus cereus ATCC 10987	Mutation(s): 0  Gene Names: BCE_2095
UniProt
Find proteins for Q739P5 (Bacillus cereus (strain ATCC 10987 / NRS 248)) Explore Q739P5  Go to UniProtKB:  Q739P5

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
TRS	C [auth A], D [auth B], E [auth B]	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.75 Å
• R-Value Free:  0.291 (Depositor), 0.291 (DCC) 
• R-Value Work:  0.230 (Depositor), 0.230 (DCC) 
• R-Value Observed: 0.233 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 71.067	α = 90
b = 42.176	β = 92.45
c = 106.032	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
BLU-MAX	data collection
HKL-3000	data scaling
HKL-3000	phasing
Coot	model building
ARP	model building
HKL-3000	data reduction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-12-16 
Deposition Author(s): Halavaty, A.S., Filippova, E.V., Wawrzak, Z., Minasov, G., Kiryukhina, O., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2015-12-16
  Type: Initial release
  
• Version 1.1: 2024-10-30
  Changes: Data collection, Database references, Derived calculations, Refinement description, Structure summary