5BT9

Crystal Structure of FolM Alternative dihydrofolate reductase 1 from Brucella canis complexed with NADP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.169 
  • R-Value Observed: 0.170 

Starting Model: experimental
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This is version 1.3 of the entry. See complete history


Literature

Crystal structures of FolM alternative dihydrofolate reductase 1 from Brucella suis and Brucella canis.

Porter, I.Neal, T.Walker, Z.Hayes, D.Fowler, K.Billups, N.Rhoades, A.Smith, C.Smith, K.Staker, B.L.Dranow, D.M.Mayclin, S.J.Subramanian, S.Edwards, T.E.Myler, P.J.Asojo, O.A.

(2022) Acta Crystallogr F Struct Biol Commun 78: 31-38

  • DOI: https://doi.org/10.1107/S2053230X21013078
  • Primary Citation of Related Structures:  
    5BT9, 5TGD

  • PubMed Abstract: 

    Members of the bacterial genus Brucella cause brucellosis, a zoonotic disease that affects both livestock and wildlife. Brucella are category B infectious agents that can be aerosolized for biological warfare. As part of the structural genomics studies at the Seattle Structural Genomics Center for Infectious Disease (SSGCID), FolM alternative dihydrofolate reductases 1 from Brucella suis and Brucella canis were produced and their structures are reported. The enzymes share ∼95% sequence identity but have less than 33% sequence identity to other homologues with known structure. The structures are prototypical NADPH-dependent short-chain reductases that share their highest tertiary-structural similarity with protozoan pteridine reductases, which are being investigated for rational therapeutic development.


  • Organizational Affiliation

    Department of Chemistry and Biochemistry, Hampton University, 100 William R. Harvey Way, Hampton, VA 23668, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
3-oxoacyl-(Acyl-carrier-protein) reductase
A, B, C, D
269Brucella canis ATCC 23365Mutation(s): 0 
Gene Names: fabGBCAN_A0712
UniProt
Find proteins for A9MA73 (Brucella canis (strain ATCC 23365 / NCTC 10854))
Explore A9MA73 
Go to UniProtKB:  A9MA73
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA9MA73
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 76.57α = 90
b = 75.6β = 109.23
c = 99.18γ = 90
Software Package:
Software NamePurpose
XSCALEdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
BALBESphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2015-07-29
    Type: Initial release
  • Version 1.1: 2015-10-07
    Changes: Database references, Source and taxonomy
  • Version 1.2: 2023-09-20
    Changes: Data collection, Database references, Derived calculations
  • Version 1.3: 2023-09-27
    Changes: Refinement description