Crystal structure of human NLRP12 PYD domain and implication in homotypic interaction
Jin, T., Huang, M., Jiang, J., Smith, P., Xiao, T.To be published.
Experimental Data Snapshot
Starting Models: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 12 | 480 | Escherichia coli O157:H7, Homo sapiens This entity is chimeric | Mutation(s): 0  Gene Names: malE, Z5632, ECs5017, NLRP12, NALP12, PYPAF7, RNO | ||
UniProt | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AEX9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FMT Query on FMT | E [auth A], F [auth A], I [auth B], J [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
NA Query on NA | G [auth A] H [auth A] K [auth B] L [auth B] M [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900001 Query on PRD_900001 | C, D | alpha-maltose | Oligosaccharide / Nutrient |
Length ( Å ) | Angle ( ˚ ) |
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a = 52.72 | α = 90 |
b = 103.62 | β = 90 |
c = 186.74 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |