Download MendeleyStructure of tau peptide in complex with Tau5 antibody Fab fragment
Cehlar, O., Skrabana, R., Novak, M.To be published.
4TQE
Structure of tau peptide in complex with Tau5 antibody Fab fragment
- PDB DOI: https://doi.org/10.2210/pdb4TQE/pdb
- Classification: IMMUNE SYSTEM
- Organism(s): Mus musculus, Homo sapiens
- Mutation(s): No
- Deposited: 2014-06-11 Released: 2015-07-29
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.197
- R-Value Work: 0.151
- R-Value Observed: 0.153
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| If kappa light chain | A [auth L] | 218 | Mus musculus | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for A2NHM3 (Mus musculus) Explore A2NHM3 Go to UniProtKB: A2NHM3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A2NHM3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fab heavy chain | B [auth H] | 222 | Mus musculus | Mutation(s): 0 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Microtubule-associated protein tau | C [auth A] | 16 | Homo sapiens | Mutation(s): 0 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P10636 (Homo sapiens) Explore P10636 Go to UniProtKB: P10636 | |||||
PHAROS: P10636 GTEx: ENSG00000186868 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P10636 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PGE Query on PGE | M [auth H] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | D [auth L], E [auth L], F [auth L], G [auth L], K [auth H] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| NA Query on NA | H [auth L], I [auth L], J [auth L], L [auth H] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.197
- R-Value Work: 0.151
- R-Value Observed: 0.153
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 124.865 | α = 90 |
| b = 59.732 | β = 112.76 |
| c = 71.041 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| PHASER | phasing |
| XSCALE | data scaling |
Entry History
Deposition Data
- Released Date: 2015-07-29 Deposition Author(s): Cehlar, O., Skrabana, R., Novak, M.
Revision History (Full details and data files)
- Version 1.0: 2015-07-29
Type: Initial release - Version 1.1: 2018-03-07
Changes: Data collection - Version 1.2: 2023-12-20
Changes: Data collection, Database references, Derived calculations, Refinement description - Version 1.3: 2024-10-09
Changes: Structure summary
