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 33QJ | pdb_000033qj

Cytochrome P450 Reductases in complex with NADPH from Candida albicans


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 
    0.252 (Depositor), 0.253 (DCC) 
  • R-Value Work: 
    0.203 (Depositor), 0.212 (DCC) 
  • R-Value Observed: 
    0.206 (Depositor) 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history. 

Literature

To Be Published

Gidaga, M.S., Smit, M.S., Ebrecht, A.C., Opperman, D.J.

To be published.

Macromolecule Content 

  • Total Structure Weight: 157.74 kDa 
  • Atom Count: 10,475 
  • Modeled Residue Count: 1,252 
  • Deposited Residue Count: 1,360 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
NADPH--cytochrome P450 reductase
A, B
680Candida albicansMutation(s): 0 
Gene Names: NCP1, CAALFM_C403180WA, orf19.2672
EC: 1.6.2.4
UniProt
Find proteins for A0A1D8PLR7 (Candida albicans (strain SC5314 / ATCC MYA-2876))
Explore A0A1D8PLR7 
Go to UniProtKB:  A0A1D8PLR7
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A1D8PLR7
Sequence Annotations
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Reference Sequence

Small Molecules

Ligands 4 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
FAD
(Subject of Investigation/LOI)

Query on FAD



Download:Ideal Coordinates CCD File
D [auth A],
H [auth B]
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
NDP
(Subject of Investigation/LOI)

Query on NDP



Download:Ideal Coordinates CCD File
E [auth A],
I [auth B]
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
FMN
(Subject of Investigation/LOI)

Query on FMN



Download:Ideal Coordinates CCD File
C [auth A],
G [auth B]
FLAVIN MONONUCLEOTIDE
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
GOL

Query on GOL



Download:Ideal Coordinates CCD File
F [auth A],
J [auth B],
K [auth B],
L [auth B]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free:  0.252 (Depositor), 0.253 (DCC) 
  • R-Value Work:  0.203 (Depositor), 0.212 (DCC) 
  • R-Value Observed: 0.206 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 104.568α = 90
b = 106β = 90
c = 116.789γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
Aimlessdata scaling
XDSdata reduction
PHASERphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Science and Innovation, South AfricaSouth Africa--

Revision History  (Full details and data files)

  • Version 1.0: 2026-11-11
    Type: Initial release