2LR6 | pdb_00002lr6

NMR structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from Homo sapiens

PDB DOI: https://doi.org/10.2210/pdb2LR6/pdb
BMRB: 18349

Classification: RNA BINDING PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2012-03-26 Released: 2012-07-04
Deposition Author(s): Serrano, P., Geralt, M., Mohanty, B., Wuthrich, K., Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 80
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2LR6

This is version 1.4 of the entry. See complete history.

Literature

NMR structure of a LINE-1 type transposase domain-containing protein 1 (L1TD1) from Homo sapiens

Serrano, P., Geralt, M., Mohanty, B., Wuthrich, K.

To be published.

Macromolecule Content

Total Structure Weight: 19.82 kDa
Atom Count: 1,387
Modeled Residue Count: 176
Deposited Residue Count: 176
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
LINE-1 type transposase domain-containing protein 1	A, B	88	Homo sapiens	Mutation(s): 2 Gene Names: L1TD1, ECAT11
UniProt & NIH Common Fund Data Resources
Find proteins for Q5T7N2 (Homo sapiens) Explore Q5T7N2 Go to UniProtKB: Q5T7N2
PHAROS: Q5T7N2 GTEx: ENSG00000240563
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q5T7N2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 80
Conformers Submitted: 20
Selection Criteria: target function

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2012-07-04

Deposition Author(s):

Joint Center for Structural Genomics (JCSG)

Partnership for Stem Cell Biology (STEMCELL)

Revision History (Full details and data files)

Version 1.0: 2012-07-04
Type: Initial release
Version 1.1: 2015-10-21
Changes: Database references, Structure summary
Version 1.2: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.3: 2024-05-15
Changes: Data collection, Database references
Version 1.4: 2025-10-22
Changes: Structure summary

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.