1WKX | pdb_00001wkx

Crystal Structure of a Hev b 6.02 Isoallergen

PDB DOI: https://doi.org/10.2210/pdb1WKX/pdb

Classification: ALLERGEN
Organism(s): Hevea brasiliensis
Mutation(s): No

Deposited: 2004-06-12 Released: 2005-07-19
Deposition Author(s): Reyes-Lopez, C.A., Rodriguez-Romero, A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free:
0.193 (Depositor), 0.202 (DCC)
R-Value Work:
0.152 (Depositor), 0.169 (DCC)
R-Value Observed:
0.156 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Structural and Immunological Characterization of an Isoallergen of Hev b 6.02

Reyes-Lopez, C.A., Hernandez-Arana, A., Pedraza-Escalona, M., Hernandez-Santoyo, A., Mendoza, G., Llinas, P., Orozco-Martinez, S., Huerta, J., Rodriguez-Romero, A.

To be published.

Macromolecule Content

Total Structure Weight: 4.73 kDa
Atom Count: 361
Modeled Residue Count: 43
Deposited Residue Count: 43
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
HEVEIN ISOFORM 2	A	43	Hevea brasiliensis	Mutation(s): 0
UniProt
Find proteins for P02877 (Hevea brasiliensis) Explore P02877 Go to UniProtKB: P02877
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P02877
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.193 (Depositor), 0.202 (DCC)
R-Value Work: 0.152 (Depositor), 0.169 (DCC)
R-Value Observed: 0.156 (Depositor)

Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 37.2	α = 90
b = 37.2	β = 90
c = 48.79	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
CrystalClear	data reduction
d*TREK	data scaling
AMoRE	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2005-07-19

Deposition Author(s):

Reyes-Lopez, C.A.

Rodriguez-Romero, A.

Revision History (Full details and data files)

Version 1.0: 2005-07-19
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Advisory, Refinement description, Version format compliance
Version 1.3: 2023-10-25
Changes: Data collection, Database references, Refinement description
Version 1.4: 2024-10-16
Changes: Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.