1RGW | pdb_00001rgw

Solution Structure of ZASP's PDZ domain


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 1RGW

This is version 1.4 of the entry. See complete history

Literature

Solution Structure of ZASP PDZ Domain; Implications for Sarcomere Ultrastructure and Enigma Family Redundancy.

Au, Y.Atkinson, R.A.Guerrini, R.Kelly, G.Joseph, C.Martin, S.R.Muskett, F.W.Pallavicini, A.Faulkner, G.Pastore, A.

(2004) Structure 12: 611-622

  • DOI: https://doi.org/10.1016/j.str.2004.02.019
  • Primary Citation Related Structures: 
    1RGW

  • PubMed Abstract: 

    Z band alternately spliced PDZ-containing protein (ZASP) is a sarcomere Z disk protein expressed in human cardiac and skeletal muscle that is thought to be involved in a dominant familial dilated cardiomyopathy. The N-terminal PDZ domain of ZASP interacts with the C terminus of alpha-actinin-2, the major component of the Z disk, probably by forming a ternary complex with titin Z repeats. We have determined the structure of ZASP PDZ by NMR and showed that it is a classical class 1 PDZ domain that recognizes the carboxy-terminal sequence of an alpha-actinin-2 calmodulin-like domain with micromolar affinity. We also characterized the role of each component in the ternary complex ZASP/alpha-actinin-2/titin, showing that the alpha-actinin-2/ZASP PDZ interaction involves a binding surface distinct from that recognized by the titin Z repeats. ZASP PDZ structure was used to model other members of the enigma family by homology and to predict their abilities to bind alpha-actinin-2.


  • Organizational Affiliation
    • National Institute for Medical Research, The Ridgeway, Mill Hill, London, NW7 1AA, United Kingdom.

Macromolecule Content 

  • Total Structure Weight: 9.15 kDa 
  • Atom Count: 641 
  • Modeled Residue Count: 85 
  • Deposited Residue Count: 85 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
ZASP protein85Homo sapiensMutation(s): 1 
Gene Names: ZASP
UniProt & NIH Common Fund Data Resources
Find proteins for O75112 (Homo sapiens)
Explore O75112 
Go to UniProtKB:  O75112
PHAROS:  O75112
GTEx:  ENSG00000122367 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO75112
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2004-04-13
    Type: Initial release
  • Version 1.1: 2008-04-29
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2021-10-27
    Changes: Database references, Derived calculations
  • Version 1.4: 2024-05-22
    Changes: Data collection