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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "SSOP1_2677"

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Thermostichus vulcanus (14)
	Porphyridium purpureum (2)
	Arthrospira sp. FACHB-439 (1)
	Pisum sativum (1)

Taxonomy

	Bacteria (15)
	Eukaryota (3)

Experimental Method

	X-RAY DIFFRACTION (14)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	2.0 - 2.5 (14)
	3.0 - 3.5 (1)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)

Release Date

2020 - 2024 (18)

Enzyme Classification Name

Oxidoreductases (18)

Membrane Protein Annotation

	PDBTM (15)
	mpstruc (2)

Symmetry Type

	Asymmetric (17)
	Cyclic (1)

AllSelected

1 to 18 of 18 Structures

Page 1 of 1

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Explore in 3D

6YP7 \| pdb_00006yp7	Download File View File

PSII-LHCII C2S2 supercomplex from Pisum sativum grown in high light conditions

Grinzato, A., Albanese, P., Zanotti, G., Pagliano, C.

(2020) Int J Mol Sci 21:

Released	2020-11-25
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Pisum sativum
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CHL, CL, CLA, DGD, FE2, HEM, LHG, LMG, LUT, NEX, OEX, PHO, PL9, SQD, XAT

Explore in 3D

7Y5E \| pdb_00007y5e	Download File View File

In situ single-PBS-PSII-PSI-LHCs megacomplex.

You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sui, S.F.

(2023) Nature 616: 199-206

Released	2023-02-01
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Porphyridium purpureum
Macromolecule	Unique protein chains: 81
Unique Ligands	3XQ, BCR, BCT, BGC, CL, CLA, CYC, DGD, FE, FES, GOL, HEM, LHG, LMG, OEX, PEB, PHO, PL9, PQN, PUB, SF4, ZEX

Explore in 3D

7Y7A \| pdb_00007y7a	Download File View File

In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.

You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sun, S., Sui, S.F.

(2023) Nature 616: 199-206

Released	2023-02-08
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Porphyridium purpureum
Macromolecule	Unique protein chains: 81
Unique Ligands	3XQ, BCR, BCT, BGC, CL, CLA, CYC, DGD, FE, FES, GOL, HEM, LHG, LMG, OEX, PEB, PHO, PL9, PQN, PUB, SF4, ZEX

Explore in 3D

8IR5 \| pdb_00008ir5	Download File View File

XFEL structure of cyanobacterial photosystem II under dark conditions

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IR6 \| pdb_00008ir6	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IR7 \| pdb_00008ir7	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-nanosecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IR8 \| pdb_00008ir8	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 1-microsecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IR9 \| pdb_00008ir9	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 30-microsecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRA \| pdb_00008ira	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-microsecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRB \| pdb_00008irb	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRC \| pdb_00008irc	Download File View File

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay (Single conformation)

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRD \| pdb_00008ird	Download File View File

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 20-nanosecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRE \| pdb_00008ire	Download File View File

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-nanosecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRF \| pdb_00008irf	Download File View File

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 1-microsecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRG \| pdb_00008irg	Download File View File

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 30-microsecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, PHO, PL9, SQD, UNL

Explore in 3D

8IRH \| pdb_00008irh	Download File View File

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-microsecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, OEY, PHO, PL9, SQD, UNL

Explore in 3D

8IRI \| pdb_00008iri	Download File View File

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 5-millisecond delay

Li, H., Suga, M., Shen, J.R.

(2024) Nature 626: 670-677

Released	2024-01-17
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermostichus vulcanus
Macromolecule	Unique protein chains: 20
Unique Ligands	BCR, BCT, CA, CL, CLA, DGD, FE2, GOL, HEC, HEM, HTG, LHG, LMG, LMT, MG, OEX, OEY, PHO, PL9, SQD, UNL

Explore in 3D

8WQL \| pdb_00008wql	Download File View File

In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis

You, X., Zhang, X., Xiao, Y.N., Sun, S., Sui, S.F.

To be published

Released	2024-07-31
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Arthrospira sp. FACHB-439
Macromolecule	Unique protein chains: 32
Unique Ligands	BCR, BCT, CA, CL, CLA, CYC, DGD, FE2, HEM, LHG, LMG, LMT, OEX, PHO, PL9, SQD

1 to 18 of 18 Structures

Page 1 of 1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

6YP7 | pdb_00006yp7

PSII-LHCII C2S2 supercomplex from Pisum sativum grown in high light conditions

7Y5E | pdb_00007y5e

In situ single-PBS-PSII-PSI-LHCs megacomplex.

7Y7A | pdb_00007y7a

In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.

8IR5 | pdb_00008ir5

XFEL structure of cyanobacterial photosystem II under dark conditions

8IR6 | pdb_00008ir6

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay

8IR7 | pdb_00008ir7

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-nanosecond delay

8IR8 | pdb_00008ir8

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 1-microsecond delay

8IR9 | pdb_00008ir9

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 30-microsecond delay

8IRA | pdb_00008ira

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-microsecond delay

8IRB | pdb_00008irb

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay

8IRC | pdb_00008irc

XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay (Single conformation)

8IRD | pdb_00008ird

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 20-nanosecond delay

8IRE | pdb_00008ire

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-nanosecond delay

8IRF | pdb_00008irf

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 1-microsecond delay

8IRG | pdb_00008irg

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 30-microsecond delay

8IRH | pdb_00008irh

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-microsecond delay

8IRI | pdb_00008iri

XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 5-millisecond delay

8WQL | pdb_00008wql

In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

6YP7 | pdb_00006yp7

7Y5E | pdb_00007y5e

7Y7A | pdb_00007y7a

8IR5 | pdb_00008ir5

8IR6 | pdb_00008ir6

8IR7 | pdb_00008ir7

8IR8 | pdb_00008ir8

8IR9 | pdb_00008ir9

8IRA | pdb_00008ira

8IRB | pdb_00008irb

8IRC | pdb_00008irc

8IRD | pdb_00008ird

8IRE | pdb_00008ire

8IRF | pdb_00008irf

8IRG | pdb_00008irg

8IRH | pdb_00008irh

8IRI | pdb_00008iri

8WQL | pdb_00008wql