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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "POL30"

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Search Summary

This query matches 58 Structures.

Refinements

Structure Determination Methodology

experimental (58)

Scientific Name of Source Organism

	Saccharomyces cerevisiae (39)
	Saccharomyces cerevisiae S288C (19)
	synthetic construct (10)
	Candida albicans SC5314 (1)
	Homo sapiens (1)
	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (1)

Taxonomy

	Eukaryota (58)
	other sequences (10)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (31)
	ELECTRON MICROSCOPY (27)

Polymer Entity Type

	Protein (58)
	DNA (21)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (6)
	2.5 - 3.0 (24)
	3.0 - 3.5 (17)
	3.5 - 4.0 (7)
	4.0 - 4.5 (3)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (4)
	2010 - 2014 (9)
	2015 - 2019 (13)
	2020 - 2024 (31)

Enzyme Classification Name

	Transferases (3)
	Hydrolases (4)
	Ligases (2)
	Isomerases (1)

Symmetry Type

	Asymmetric (41)
	Cyclic (18)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a+b) (26)
	Artifacts (6)
	All alpha proteins (1)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 58 Structures

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1SXJ \| pdb_00001sxj	Download File View File

Crystal Structure of the Eukaryotic Clamp Loader (Replication Factor C, RFC) Bound to the DNA Sliding Clamp (Proliferating Cell Nuclear Antigen, PCNA)

Bowman, G.D., O'Donnell, M., Kuriyan, J.

(2004) Nature 429: 724-730

Released	2004-06-22
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Unique protein chains: 6
Unique Ligands	ADP, AGS, MG

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2OD8 \| pdb_00002od8	Download File View File

Structure of a peptide derived from Cdc9 bound to PCNA

Chapados, B.R., Tainer, J.A.

(2007) Nucleic Acids Res 35: 1624-1637

Released	2007-05-01
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	DNA ligase I, mitochondrial precursor (protein) Proliferating cell nuclear antigen (protein)

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3F1W \| pdb_00003f1w	Download File View File

Crystal structure of a mutant proliferating cell nuclear antigen that blocks translesion synthesis

Freudenthal, B.D., Ramaswamy, S., Washington, M.T.

(2008) Biochemistry 47: 13354-13361

Released	2008-12-23
Method	X-RAY DIFFRACTION 2.901 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Proliferating cell nuclear antigen (protein)

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3GPM \| pdb_00003gpm	Download File View File

Structure of the trimeric form of the E113G PCNA mutant protein

Freudenthal, B.D., Gakhar, L., Ramaswamy, S., Washington, M.T.

(2009) Acta Crystallogr D Biol Crystallogr 65: 560-566

Released	2009-06-16
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Proliferating cell nuclear antigen (protein)

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3GPN \| pdb_00003gpn	Download File View File

Structure of the non-trimeric form of the E113G PCNA mutant protein

Freudenthal, B.D., Gakhar, L., Ramaswamy, S., Washington, M.T.

(2009) Acta Crystallogr D Biol Crystallogr 65: 560-566

Released	2009-06-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Proliferating cell nuclear antigen (protein)

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3K4X \| pdb_00003k4x	Download File View File

Eukaryotic Sliding Clamp PCNA Bound to DNA

McNally, R., Kuriyan, J.

(2010) BMC Struct Biol 10: 3-3

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.98 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Proliferating cell nuclear antigen (protein) DNA (5'-D(CPCPCPAPTPCPGPTPAPT)-3') (nucleic acid) DNA (5'-D(TPTPTPTPAPTPAPCPGPAPTPGPGPG)-3') (nucleic acid)

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3L0W \| pdb_00003l0w	Download File View File

Structure of split monoubiquitinated PCNA with ubiquitin in position two

Freudenthal, B.D., Gakhar, L., Ramaswamy, S., Washington, M.T.

(2010) Nat Struct Mol Biol 17: 479-484

Released	2010-03-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Monoubiquitinated Proliferating cell nuclear antigen (protein) Proliferating cell nuclear antigen (protein)

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3L0X \| pdb_00003l0x	Download File View File

Structure of split yeast PCNA

Freudenthal, B.D., Gakhar, L., Ramaswamy, S., Washington, M.T.

(2010) Nat Struct Mol Biol 17: 479-484

Released	2010-03-23
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Proliferating cell nuclear antigen (protein)

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3L10 \| pdb_00003l10	Download File View File

Structure of split monoubiquitinated PCNA with ubiquitin in position one

Freudenthal, B.D., Gakhar, L., Ramaswamy, S., Washington, M.T.

(2010) Nat Struct Mol Biol 17: 479-484

Released	2010-03-23
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Monoubiquitinated Proliferating cell nuclear antigen (protein) Proliferating cell nuclear antigen (protein)

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3V60 \| pdb_00003v60	Download File View File

Structure of S. cerevisiae PCNA conjugated to SUMO on lysine 164

Armstrong, A.A., Mohideen, F., Lima, C.D.

(2012) Nature 483: 59-63

Released	2012-02-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein) Ubiquitin-like protein SMT3 (protein)
Unique Ligands	SO4

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3V61 \| pdb_00003v61	Download File View File

Structure of S. cerevisiae PCNA conjugated to SUMO on lysine 164

Armstrong, A.A., Mohideen, F., Lima, C.D.

(2012) Nature 483: 59-63

Released	2012-02-29
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein) Ubiquitin-like protein SMT3 (protein)
Unique Ligands	BA, NEQ

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3V62 \| pdb_00003v62	Download File View File

Structure of the S. cerevisiae Srs2 C-terminal domain in complex with PCNA conjugated to SUMO on lysine 164

Armstrong, A.A., Mohideen, F., Lima, C.D.

(2012) Nature 483: 59-63

Released	2012-02-29
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	ATP-dependent DNA helicase SRS2 (protein) Proliferating cell nuclear antigen (protein) Ubiquitin-like protein SMT3 (protein)
Unique Ligands	NEQ, SO4

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4L60 \| pdb_00004l60	Download File View File

Structure of C81R Mutant PCNA Protein Defective in Mismatch Repair

Washington, T., Boehm, E.

(2013) Biochemistry 52: 5611-5619

Released	2013-10-02
Method	X-RAY DIFFRACTION 3.003 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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4L6P \| pdb_00004l6p	Download File View File

Structure of C22Y Mutant PCNA protein defective in DNA mismatch repair

Washington, T., Boehm, E.

(2013) Biochemistry 52: 5611-5619

Released	2014-10-01
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)
Unique Ligands	GOL

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4YHR \| pdb_00004yhr	Download File View File

Crystal Structure of Yeast Proliferating Cell Nuclear Antigen

Litman, J.M., Nguyen, V.Q., Kondratick, C.M., Powers, K.T., Schnieders, M.J., Washington, M.T.

To be published

Released	2015-03-18
Method	X-RAY DIFFRACTION 2.9502 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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5JNE \| pdb_00005jne	Download File View File

E2-SUMO-Siz1 E3-SUMO-PCNA complex

Lima, C.D., Streich Jr., F.C.

(2016) Nature 536: 304-308

Released	2016-08-10
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	E3 SUMO-protein ligase SIZ1,Ubiquitin-like protein SMT3 (protein) Proliferating cell nuclear antigen (protein) SUMO-conjugating enzyme UBC9 (protein) Ubiquitin-like protein SMT3 (protein)
Unique Ligands	6LN, GOL, ZN

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5T9D \| pdb_00005t9d	Download File View File

Structure of PCNA acetylated on K20

Couture, J.F., Tremblay, V., Brunzelle, J.S.

To be published

Released	2017-04-05
Method	X-RAY DIFFRACTION 3.27 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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5V7K \| pdb_00005v7k	Download File View File

PCNA mutant D41A/D42A Protein Defective in Gene Silencing

Kondratick, C.M., Litman, J.M., Washington, M.T., Dieckman, L.M.

(2018) PLoS One 13: e0193333-e0193333

Released	2018-03-14
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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5V7L \| pdb_00005v7l	Download File View File

PCNA mutant R61A/D63A Protein Defective in Gene Silencing

Kondratick, C.M., Litman, J.M., Washington, M.T., Dieckman, L.M.

(2018) PLoS One 13: e0193333-e0193333

Released	2018-03-14
Method	X-RAY DIFFRACTION 3.201 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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5V7M \| pdb_00005v7m	Download File View File

PCNA mutant L126A/I128A Protein Defective in Gene Silencing

Kondratick, C.M., Litman, J.M., Washington, M.T., Dieckman, L.M.

(2018) PLoS One 13: e0193333-e0193333

Released	2018-03-14
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)
Unique Ligands	MG

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5ZUT \| pdb_00005zut	Download File View File

Crystal Structure of Yeast PCNA in Complex with N24 Peptide

Cheng, X.Y., Kuang, X.L., Zhou, Y., Xia, X.M., SU, Z.D.

To be published

Released	2018-05-30
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	N24 (protein) Proliferating cell nuclear antigen (protein)

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6CX2 \| pdb_00006cx2	Download File View File

S177G Mutant of Yeast PCNA

Powers, K.T.

(2016) PLoS One 11: e0157023

Released	2018-04-11
Method	X-RAY DIFFRACTION 3.101 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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6CX3 \| pdb_00006cx3	Download File View File

S179T Mutant of Yeast PCNA

Powers, K.T.

(2016) PLoS One 11: e0157023

Released	2018-04-11
Method	X-RAY DIFFRACTION 3.101 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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6CX4 \| pdb_00006cx4	Download File View File

V180A Mutant of Yeast PCNA

Powers, K.T.

(2016) PLoS One 11: e0157023

Released	2018-04-11
Method	X-RAY DIFFRACTION 3.081 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

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6D0Q \| pdb_00006d0q	Download File View File

Structure of a DNA retention-prone PCNA variant

Kelch, B.A., Gaubitz, C.

(2019) Nucleic Acids Res 47: 6826-6841

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.80051015589 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Proliferating cell nuclear antigen (protein)

1 to 25 of 58 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1SXJ | pdb_00001sxj

2OD8 | pdb_00002od8

3F1W | pdb_00003f1w

3GPM | pdb_00003gpm

3GPN | pdb_00003gpn

3K4X | pdb_00003k4x

3L0W | pdb_00003l0w

3L0X | pdb_00003l0x

3L10 | pdb_00003l10

3V60 | pdb_00003v60

3V61 | pdb_00003v61

3V62 | pdb_00003v62

4L60 | pdb_00004l60

4L6P | pdb_00004l6p

4YHR | pdb_00004yhr

5JNE | pdb_00005jne

5T9D | pdb_00005t9d

5V7K | pdb_00005v7k

5V7L | pdb_00005v7l

5V7M | pdb_00005v7m

5ZUT | pdb_00005zut

6CX2 | pdb_00006cx2

6CX3 | pdb_00006cx3

6CX4 | pdb_00006cx4

6D0Q | pdb_00006d0q