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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 28 Structures.

Refinements

Structure Determination Methodology

experimental (28)

Scientific Name of Source Organism

	Homo sapiens (22)
	Schizosaccharomyces pombe (2)
	Araneus ventricosus (1)
	Argiope trifasciata (1)
	Ebola virus - Zaire (1995) (1)
	Pisum sativum (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (27)
	Riboviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (26)
	SOLUTION NMR (2)

Polymer Entity Type

	Protein (28)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (8)
	2.0 - 2.5 (6)
	2.5 - 3.0 (7)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (3)
	2015 - 2019 (2)
	2020 - 2024 (23)

Enzyme Classification Name

	Transferases (13)
	Hydrolases (5)
	Oxidoreductases (2)
	Lyases (1)

Symmetry Type

	Asymmetric (23)
	Cyclic (5)
	Dihedral (1)

SCOP Classification

Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 28 Structures

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2MFZ \| pdb_00002mfz	Download File View File

NMR structure of C-terminal domain from A. ventricosus minor ampullate spidroin (MiSp)

Otikovs, M., Jaudzems, K., Andersson, M., Chen, G., Landreh, M., Nordling, K., Kronqvist, N., Westermark, P., Jornvall, H., Knight, S., Ridderstrale, Y., Holm, L., Meng, Q., Chesler, M., Johansson, J., Rising, A.

(2014) PLoS Biol 12: e1001921-e1001921

Released	2014-08-20
Method	SOLUTION NMR
Organisms	Araneus ventricosus
Macromolecule	Minor ampullate spidroin (protein)

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2MU3 \| pdb_00002mu3	Download File View File

Spider wrapping silk fibre architecture arising from its modular soluble protein precursor

Xu, L., Tremblay, M., Meng, Q., Liu, X., Rainey, J.K., Lefevre, T., Sarker, M., Orrell, K.E., Leclerc, J., Pezolet, M., Auger, M.

(2015) Sci Rep 5: 11502-11502

Released	2015-07-08
Method	SOLUTION NMR
Organisms	Argiope trifasciata
Macromolecule	Aciniform spidroin 1 (protein)

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4BMC \| pdb_00004bmc	Download File View File

Crystal structure of s.pombe Rad4 BRCT1,2

Meng, Q., Rappas, M., Wardlaw, C.P., Garcia, V., Carr, A.M., Oliver, A.W., Du, L.L., Pearl, L.H.

(2013) Mol Cell 51: 723

Released	2013-10-09
Method	X-RAY DIFFRACTION 1.982 Å
Organisms	Schizosaccharomyces pombe
Macromolecule	S-M CHECKPOINT CONTROL PROTEIN RAD4 (protein)
Unique Ligands	CL

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4BMD \| pdb_00004bmd	Download File View File

Crystal structure of S.pombe Rad4 BRCT3,4

Meng, Q., Rappas, M., Wardlaw, C.P., Garcia, V., Carr, A.M., Oliver, A.W., Du, L.L., Pearl, L.H.

(2013) Mol Cell 51: 723

Released	2013-10-09
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Schizosaccharomyces pombe
Macromolecule	S-M CHECKPOINT CONTROL PROTEIN RAD4 (protein)
Unique Ligands	CL, MES

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4ZTU \| pdb_00004ztu	Download File View File

Structural basis for processivity and antiviral drug toxicity in human mitochondrial DNA replicase

Szymanski, M.R., Kuznestov, V.B., Shumate, C.K., Meng, Q., Lee, Y.-S., Patel, G., Patel, S.S., Yin, Y.W.

(2015) EMBO J 34: 1959

Released	2015-09-23
Method	X-RAY DIFFRACTION 3.299 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase subunit gamma-1 (protein) DNA polymerase subunit gamma-2, mitochondrial (protein) DNA (25-MER) (nucleic acid) DNA (5'-D(PAPAPGPAPCPGPAPGPGPGPCPCPAPGPTPGPCPCPGPTPAPC)-3') (nucleic acid)
Unique Ligands	DCT, MG

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7DSF \| pdb_00007dsf	Download File View File

The Crystal Structure of human SPR from Biortus.

Wang, F., Lv, Z., Cheng, W., Lin, D., Meng, Q., Zhang, B., Huang, Y.

To be published

Released	2021-01-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Sepiapterin reductase (protein)
Unique Ligands	ACT, NAP, ZN

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8J1K \| pdb_00008j1k	Download File View File

co-crystal structure of non-carboxylic acid inhibitor with PHD2

Xu, J., Fu, Y., Ding, X., Meng, Q., Wang, L., Zhang, M., Ding, X., Ren, F., Zhavoronkov, A.

To be published

Released	2024-04-17
Method	X-RAY DIFFRACTION 2.451 Å
Organisms	Homo sapiens
Macromolecule	Egl nine homolog 1 (protein)
Unique Ligands	MN, SY6

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8TH2 \| pdb_00008th2	Download File View File

Structure of the isoflavene-forming dirigent protein PsPTS2

Smith, C.A., Meng, Q., Lewis, N.G., Davin, L.B.

(2024) J Biological Chem 300: 105647-105647

Released	2024-01-31
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pisum sativum
Macromolecule	Dirigent protein (protein)

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8WFR \| pdb_00008wfr	Download File View File

The Crystal Structure of PCSK9 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Lu, Y.

To be published

Released	2023-11-22
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Proprotein convertase subtilisin/kexin type 9 (protein)
Unique Ligands	EDO, EPE, GOL

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8WTF \| pdb_00008wtf	Download File View File

The Crystal Structure of IRAK4 from Biortus

Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.

To be published

Released	2023-11-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 receptor-associated kinase 4 (protein)
Unique Ligands	8CG, EDO, SO4

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8X2P \| pdb_00008x2p	Download File View File

The Crystal Structure of LCK from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Lu, Y.

To be published

Released	2023-11-22
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase Lck (protein)
Unique Ligands	CL, EDO, PG4, PGE

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8X2R \| pdb_00008x2r	Download File View File

The Crystal Structure of HSP 90-alpha from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Lu, Y.

To be published

Released	2023-11-22
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	Heat shock protein HSP 90-alpha (protein)
Unique Ligands	EDO, GOL

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8X70 \| pdb_00008x70	Download File View File

The Crystal Structure of IFI16 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Wang, J.

To be published

Released	2023-12-27
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Gamma-interferon-inducible protein 16 (protein)
Unique Ligands	BR, EDO, K, PGE

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8X87 \| pdb_00008x87	Download File View File

The Crystal Structure of HspBP1 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.

To be published

Released	2023-12-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Hsp70-binding protein 1 (protein)

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8X88 \| pdb_00008x88	Download File View File

The Crystal Structure of TNIK from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.

To be published

Released	2023-12-13
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	TRAF2 and NCK-interacting protein kinase (protein)

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8XB9 \| pdb_00008xb9	Download File View File

The Crystal Structure of polo-box domain of PLK1 from Biortus.

Wang, F., Cheng, W., Yuan, Z., Meng, Q., Zhang, B.

To be published

Released	2023-12-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase PLK1 (protein)
Unique Ligands	EDO

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8XEY \| pdb_00008xey	Download File View File

The Crystal Structure of C-terminal kinase domain of RSK2 from Biortus

Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.

To be published

Released	2024-03-06
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Ribosomal protein S6 kinase alpha-3 (protein)
Unique Ligands	EDO, PEG

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8XOV \| pdb_00008xov	Download File View File

The Crystal Structure of N-terminal kinase domain of human RSK-1 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.

To be published

Released	2024-03-06
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	Ribosomal protein S6 kinase alpha-1 (protein)
Unique Ligands	ANP, EDO

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8XOY \| pdb_00008xoy	Download File View File

The Crystal Structure of PTP1B from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Li, J.

To be published

Released	2024-01-24
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein phosphatase non-receptor type 1 (protein)
Unique Ligands	CL, EDO, GOL, MG

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8XPG \| pdb_00008xpg	Download File View File

The Crystal Structure of polo box domain of Plk4 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.

To be published

Released	2024-03-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase PLK4 (protein)
Unique Ligands	SO4

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8XPV \| pdb_00008xpv	Download File View File

The Crystal Structure of EphA2 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.

To be published

Released	2024-01-24
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Ephrin type-A receptor 2 (protein)
Unique Ligands	4Z5, EDO, GOL

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8YGX \| pdb_00008ygx	Download File View File

Structure of the PYK2 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.

To be published

Released	2024-03-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Protein-tyrosine kinase 2-beta (protein)

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8YGY \| pdb_00008ygy	Download File View File

Structure of the KLK1 from Biortus.

Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.

To be published

Released	2024-03-13
Method	X-RAY DIFFRACTION 2.401 Å
Organisms	Homo sapiens
Macromolecule	Kallikrein-1 (protein)
Unique Ligands	EDO, SO4
Unique branched monosaccharides	FUC, NAG