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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Trainor, G.L."

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Homo sapiens (16)
	Human immunodeficiency virus 1 (1)

Taxonomy

	Eukaryota (16)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (17)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (7)
	2.5 - 3.0 (5)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (7)
	2010 - 2014 (4)
	2015 - 2019 (5)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (13)
	Hydrolases (2)

Symmetry Type

	Asymmetric (16)
	Cyclic (1)

SCOP Classification

	Alpha and beta proteins (a+b) (13)
	Artifacts (6)
	Alpha and beta proteins (a/b) (2)

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1 to 17 of 17 Structures

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2B52 \| pdb_00002b52	Download File View File

Human cyclin dependent kinase 2 (CDK2) complexed with DPH-042562

Muckelbauer, J.

(2004) Bioorg Med Chem Lett 14: 343-346

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D42

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2B53 \| pdb_00002b53	Download File View File

Human cyclin dependent kinase 2 (CDK2) complexed with DIN-234325

Muckelbauer, J.

(2001) Bioorg Med Chem Lett 11: 1157-1160

Released	2005-10-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D23

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2B54 \| pdb_00002b54	Download File View File

Human cyclin dependent kinase 2 (CKD2)complexed with DIN-232305

Chang, C.-C.

(2004) J Med Chem 47: 5894-5911

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D05

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2B55 \| pdb_00002b55	Download File View File

Human cyclin dependent kinase 2 (cdk2) complexed with indenopyraxole DIN-101312

Muckelbauer, J.

(2002) J Med Chem 45: 5233-5248

Released	2005-10-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Cell division protein kinase 2 (protein)
Unique Ligands	D31

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2FME \| pdb_00002fme	Download File View File

Crystal structure of the mitotic kinesin eg5 (ksp) in complex with mg-adp and (r)-4-(3-hydroxyphenyl)-n,n,7,8-tetramethyl-3,4-dihydroisoquinoline-2(1h)-carboxamide

Sheriff, S.

(2006) Bioorg Med Chem Lett 16: 2095-2100

Released	2006-04-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Kinesin-like protein KIF11 (protein)
Unique Ligands	3QC, ADP, MG

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3CE3 \| pdb_00003ce3	Download File View File

Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor C-MET in complex with a Pyrrolopyridinepyridone based inhibitor

Sack, J.

(2008) J Med Chem 51: 5330-5341

Released	2008-08-26
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	1FN

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3F82 \| pdb_00003f82	Download File View File

Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor C-MET in complex with N-(4-(2-amino-3-chloropyridin-4-yloxy)-3-fluorophenyl)-4-ethoxy-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide

Sack, J.

(2009) J Med Chem 52: 1251-1254

Released	2009-03-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	hepatocyte growth factor receptor (protein)
Unique Ligands	353

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3L8V \| pdb_00003l8v	Download File View File

Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor C-MET in complex with a biarylamine based inhibitor

Sack, J.

(2010) Bioorg Med Chem Lett 20: 2998-3002

Released	2010-05-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	L8V

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3Q32 \| pdb_00003q32	Download File View File

Structure of Janus kinase 2 with a pyrrolotriazine inhibitor

Sack, J.S.

(2011) Bioorg Med Chem Lett 21: 1425-1428

Released	2011-02-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	J2I

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3SKF \| pdb_00003skf	Download File View File

Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3S)-3-(acetylamino)-3-(butan-2-yl)-2-oxopyrrolidin-1-yl)-N-((2S,3R)-3-hydroxy-4-((3-methoxybenzyl)amino)-1-phenylbutan-2-yl)-4-phenylbutanamide

Muckelbauer, J.K.

(2011) Bioorg Med Chem Lett 21: 6909-6915

Released	2011-08-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Beta-secretase 1 (protein)
Unique Ligands	IOD, PB7

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3SKG \| pdb_00003skg	Download File View File

Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3R)-3-acetamido-3-isobutyl-2-oxo-1-pyrrolidinyl)-N-((1S,2R)-1-(3,5-difluorobenzyl)-2-hydroxy-2-(1,2,3,4-tetrahydro-3-isoquinolinyl)ethyl)-4-phenylbutanamide

Muckelbauer, J.K.

(2011) Bioorg Med Chem Lett 21: 6909-6915

Released	2011-09-07
Method	X-RAY DIFFRACTION 2.88 Å
Organisms	Homo sapiens
Macromolecule	Beta-secretase 1 (protein)
Unique Ligands	PB8

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4ZIM \| pdb_00004zim	Download File View File

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH A 9H-CARBAZOLE-1-CARBOXAMIDE INHIBITOR

Sack, J.S.

(2015) Bioorg Med Chem Lett 25: 2809-2812

Released	2015-06-03
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	4OK

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5CF4 \| pdb_00005cf4	Download File View File

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-10-ETHYL-7-[(3-METHOXYPROPYL)AMINO] -3-METHYL-3,5,8,10-TETRAAZATRICYCLO[7.3.0.0,6] DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

Sack, J.S.

(2015) ACS Med Chem Lett 6: 845-849

Released	2015-08-26
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	50Y

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5CF5 \| pdb_00005cf5	Download File View File

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-7-[(DIMETHYL-1,3-THIAZOL-2-YL)AMINO]-10-ETHYL-3-METHYL-3,5,8,10-TETRAAZATRICYCLO[7.3.0.02,6] DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

Sack, J.S.

(2015) ACS Med Chem Lett 6: 845-849

Released	2015-08-26
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	50W

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5CF6 \| pdb_00005cf6	Download File View File

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-10-[(2S)-2,3-DIHYDROXYPROPYL]-3-METHYL-7-(METHYLAMINO)-3,5,8,10-TETRAAZATRICYCLO [7.3.0.02,6]DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

Sack, J.S.

(2015) ACS Med Chem Lett 6: 845-849

Released	2015-08-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	50O

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5CF8 \| pdb_00005cf8	Download File View File

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-10-ETHYL-7-[(3-METHOXYPROPYL)AMINO] -3-METHYL-3,5,8,10-TETRAAZATRICYCLO[7.3.0.0,6] DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

Sack, J.S.

(2015) ACS Med Chem Lett 6: 850-855

Released	2015-08-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase JAK2 (protein)
Unique Ligands	50V

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6UM8 \| pdb_00006um8	Download File View File

HIV Integrase in complex with Compound-14

Khan, J.A., Kish, K.

(2020) J Med Chem 63: 2620-2637

Released	2020-03-04
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Integrase (protein)
Unique Ligands	1PE, PEG, QCG, SO4

1 to 17 of 17 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2B52 | pdb_00002b52

Human cyclin dependent kinase 2 (CDK2) complexed with DPH-042562

2B53 | pdb_00002b53

Human cyclin dependent kinase 2 (CDK2) complexed with DIN-234325

2B54 | pdb_00002b54

Human cyclin dependent kinase 2 (CKD2)complexed with DIN-232305

2B55 | pdb_00002b55

Human cyclin dependent kinase 2 (cdk2) complexed with indenopyraxole DIN-101312

2FME | pdb_00002fme

Crystal structure of the mitotic kinesin eg5 (ksp) in complex with mg-adp and (r)-4-(3-hydroxyphenyl)-n,n,7,8-tetramethyl-3,4-dihydroisoquinoline-2(1h)-carboxamide

3CE3 | pdb_00003ce3

Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor C-MET in complex with a Pyrrolopyridinepyridone based inhibitor

3F82 | pdb_00003f82

Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor C-MET in complex with N-(4-(2-amino-3-chloropyridin-4-yloxy)-3-fluorophenyl)-4-ethoxy-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide

3L8V | pdb_00003l8v

Crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor C-MET in complex with a biarylamine based inhibitor

3Q32 | pdb_00003q32

Structure of Janus kinase 2 with a pyrrolotriazine inhibitor

3SKF | pdb_00003skf

Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3S)-3-(acetylamino)-3-(butan-2-yl)-2-oxopyrrolidin-1-yl)-N-((2S,3R)-3-hydroxy-4-((3-methoxybenzyl)amino)-1-phenylbutan-2-yl)-4-phenylbutanamide

3SKG | pdb_00003skg

Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3R)-3-acetamido-3-isobutyl-2-oxo-1-pyrrolidinyl)-N-((1S,2R)-1-(3,5-difluorobenzyl)-2-hydroxy-2-(1,2,3,4-tetrahydro-3-isoquinolinyl)ethyl)-4-phenylbutanamide

4ZIM | pdb_00004zim

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH A 9H-CARBAZOLE-1-CARBOXAMIDE INHIBITOR

5CF4 | pdb_00005cf4

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-10-ETHYL-7-[(3-METHOXYPROPYL)AMINO] -3-METHYL-3,5,8,10-TETRAAZATRICYCLO[7.3.0.0,6] DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

5CF5 | pdb_00005cf5

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-7-[(DIMETHYL-1,3-THIAZOL-2-YL)AMINO]-10-ETHYL-3-METHYL-3,5,8,10-TETRAAZATRICYCLO[7.3.0.02,6] DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

5CF6 | pdb_00005cf6

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-10-[(2S)-2,3-DIHYDROXYPROPYL]-3-METHYL-7-(METHYLAMINO)-3,5,8,10-TETRAAZATRICYCLO [7.3.0.02,6]DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

5CF8 | pdb_00005cf8

CRYSTAL STRUCTURE OF JANUS KINASE 2 IN COMPLEX WITH N,N-DICYCLOPROPYL-10-ETHYL-7-[(3-METHOXYPROPYL)AMINO] -3-METHYL-3,5,8,10-TETRAAZATRICYCLO[7.3.0.0,6] DODECA-1(9),2(6),4,7,11-PENTAENE-11-CARBOXAMIDE

6UM8 | pdb_00006um8

HIV Integrase in complex with Compound-14

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2B52 | pdb_00002b52

2B53 | pdb_00002b53

2B54 | pdb_00002b54

2B55 | pdb_00002b55

2FME | pdb_00002fme

3CE3 | pdb_00003ce3

3F82 | pdb_00003f82

3L8V | pdb_00003l8v

3Q32 | pdb_00003q32

3SKF | pdb_00003skf

3SKG | pdb_00003skg

4ZIM | pdb_00004zim

5CF4 | pdb_00005cf4

5CF5 | pdb_00005cf5

5CF6 | pdb_00005cf6

5CF8 | pdb_00005cf8

6UM8 | pdb_00006um8