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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Markolovic, S."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Homo sapiens (14)
	Drosophila melanogaster (6)

Taxonomy

Eukaryota (20)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (4)
	2.0 - 2.5 (6)
	2.5 - 3.0 (2)

Release Date

	2015 - 2019 (13)
	2020 - 2024 (7)

Enzyme Classification Name

	Oxidoreductases (20)
	Hydrolases (20)

Symmetry Type

	Asymmetric (12)
	Cyclic (8)

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1 to 20 of 20 Structures

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5NFN \| pdb_00005nfn	Download File View File

JMJD7 IN COMPLEX WITH MN AND 2OG IN THE H32 FORM

Chowdhury, R., Markolovic, S., Schofield, C.J.

To be published

Released	2018-03-14
Method	X-RAY DIFFRACTION 2.982 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 7 (protein)
Unique Ligands	AKG, GOL, MN, NO3

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5NFO \| pdb_00005nfo	Download File View File

Human JMJD7 in complex with Mn and 2OG in the P21212 form

Chowdhury, R., Markolovic, S., Schofield, C.J.

To be published

Released	2018-03-14
Method	X-RAY DIFFRACTION 2.173 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 7 (protein)
Unique Ligands	AKG, GOL, MN, NO3

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6F4M \| pdb_00006f4m	Download File View File

Human JMJD5 in its apo form.

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.705 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein)

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6F4N \| pdb_00006f4n	Download File View File

Human JMJD5 in complex with MN and 2OG.

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 2.541 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein)
Unique Ligands	AKG, MN

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6F4O \| pdb_00006f4o	Download File View File

Human JMJD5 in complex with Mn(II) and Succinate.

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein)
Unique Ligands	MN, SIN, TRS

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6F4P \| pdb_00006f4p	Download File View File

Human JMJD5 in complex with MN, NOG and RPS6 (129-144) (complex-1)

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	40S ribosomal protein S6 (protein) JmjC domain-containing protein 5 (protein)
Unique Ligands	MN, OGA, TRS

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6F4Q \| pdb_00006f4q	Download File View File

Human JMJD5 (Q275C) in complex with Mn(II), NOG and RPS6-A138C (129-144) (complex-2)

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Homo sapiens
Macromolecule	40S ribosomal protein S6 (protein) JmjC domain-containing protein 5 (protein)
Unique Ligands	GOL, MN, OGA, TRS

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6F4R \| pdb_00006f4r	Download File View File

Human JMJD5 (N308C) in complex with Mn(II), NOG and RCCD1 (139-143) (complex-3)

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein) RCC1 domain-containing protein 1 (protein)
Unique Ligands	MN, OGA, TRS

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6F4S \| pdb_00006f4s	Download File View File

Human JMJD5 (N308C) in complex with Mn(II), 2OG and RCCD1 (139-143) (complex-4)

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.461 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein) RCC1 domain-containing protein 1 (protein)
Unique Ligands	AKG, GOL, MN, TRS

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6F4T \| pdb_00006f4t	Download File View File

Human JMJD5 (W414C) in complex with Mn(II), NOG and RCCD1 (139-143) (complex-5)

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2018) Nat Commun 9: 1180-1180

Released	2018-04-04
Method	X-RAY DIFFRACTION 1.22 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein) RCC1 domain-containing protein 1 (protein)
Unique Ligands	GOL, MN, OGA, TRS

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6I9L \| pdb_00006i9l	Download File View File

JmjC domain-containing protein 5 (JMJD5) in complex with Mn and pyridine-2,4-dicarboxylic acid (2,4-PDCA)

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2022) Sci Rep 12: 20680-20680

Released	2019-12-04
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein)
Unique Ligands	MN, PD2, TRS

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6I9M \| pdb_00006i9m	Download File View File

JmjC domain-containing protein 5 (JMJD5) in complex with Mn and R-2-hydroxyglutarate

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2022) Sci Rep 12: 20680-20680

Released	2019-12-04
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein)
Unique Ligands	2HG, GOL, MN, TRS

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6I9N \| pdb_00006i9n	Download File View File

JmjC domain-containing protein 5 (JMJD5) in complex with Mn and L-2-hydroxyglutarate

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2022) Sci Rep 12: 20680-20680

Released	2019-12-04
Method	X-RAY DIFFRACTION 1.361 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing protein 5 (protein)
Unique Ligands	GOL, MN, S2G, TRS

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7UQ3 \| pdb_00007uq3	Download File View File

JmjC domain-containing protein 5 (JMJD5) in complex with Mn and (S)-2-(1-hydroxy-2,5-dioxopyrrolidin-3-yl)acetic acid

Chowdhury, R., Islam, M.S., Schofield, C.J.

(2022) Sci Rep 12: 20680-20680

Released	2022-12-21
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Homo sapiens
Macromolecule	Bifunctional peptidase and arginyl-hydroxylase JMJD5 (protein)
Unique Ligands	GOL, MN, O2U