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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "He, L."

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Search Summary

This query matches 154 Structures.

Refinements

Structure Determination Methodology

experimental (154)

Scientific Name of Source Organism

	Homo sapiens (78)
	Human immunodeficiency virus 1 (19)
	Human respiratory syncytial virus A2 (11)
	Mus musculus (10)
	Pseudomonas aeruginosa PAO1 (9)
	Rattus norvegicus (8)
	Recombinant Hepatitis C virus HK6a/JFH-1 (7)
	Helicobacter pylori (6)
	Macaca mulatta (6)
	Lama glama (5)

More...

Taxonomy

	Eukaryota (109)
	Riboviria (42)
	Bacteria (32)
	other sequences (4)
	Duplodnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (115)
	ELECTRON MICROSCOPY (33)
	SOLUTION NMR (4)
	ELECTRON CRYSTALLOGRAPHY (1)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (151)
	RNA (5)
	DNA (3)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (7)
	1.5 - 2.0 (18)
	2.0 - 2.5 (35)
	2.5 - 3.0 (34)
	3.0 - 3.5 (25)
	3.5 - 4.0 (15)
	4.0 - 4.5 (5)
	> 4.5 (8)

Release Date

	1995 - 1999 (2)
	2005 - 2009 (8)
	2010 - 2014 (3)
	2015 - 2019 (44)
	2020 - 2024 (74)
	2025 - 2029 (23)

Enzyme Classification Name

	Hydrolases (24)
	Transferases (10)
	Lyases (6)
	Isomerases (6)
	Oxidoreductases (4)
	Translocases (2)
	Ligases (1)

Membrane Protein Annotation

	PDBTM (34)
	OPM (28)
	MemProtMD (24)
	mpstruc (26)

Symmetry Type

	Asymmetric (88)
	Cyclic (50)
	Dihedral (13)
	Helical (1)
	Icosahedral (1)

SCOP Classification

	All beta proteins (18)
	Alpha and beta proteins (a/b) (12)
	Alpha and beta proteins (a+b) (11)
	Artifacts (9)
	All alpha proteins (5)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 154 Structures

Page 1 of 7

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1QES \| pdb_00001qes	Download File View File

TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES

Mcdowell, J.A., He, L., Chen, X., Turner, D.H.

(1997) Biochemistry 36: 8030-8038

Released	1997-06-05
Method	SOLUTION NMR
Macromolecule	RNA (5'-R(GPGPAPGPUPUPCPC)-3') (nucleic acid)

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1QET \| pdb_00001qet	Download File View File

TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES

Mcdowell, J.A., He, L., Chen, X., Turner, D.H.

(1997) Biochemistry 36: 8030-8038

Released	1997-06-05
Method	SOLUTION NMR
Macromolecule	RNA (5'-R(GPGPAPUPGPUPCPC)-3') (nucleic acid)

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2FET \| pdb_00002fet	Download File View File

Synthesis of C-D-Glycopyranosyl-Hydroquinones and-Benzoquinones. Inhibition of PTP1B. Inhibition of and binding to glycogen phosphorylase in the crystal

Chrysina, E.D., Kosmopoulou, M.N., Leonidas, D.D., Oikonomakos, N.G.

(2007) European J Org Chem 4: 596-606

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Glycogen phosphorylase, muscle form (protein)
Unique Ligands	H53, PLP

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2FF5 \| pdb_00002ff5	Download File View File

Synthesis of C-D-Glycopyranosyl-Hydroquinones and-Benzoquinones. Inhibition of PTP1B. Inhibition of and binding to glycogen phosphorylase in the crystal

Chrysina, E.D., Kosmopoulou, M.N., Leonidas, D.D., Oikonomakos, N.G.

(2007) European J Org Chem 4: 596-606

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Glycogen phosphorylase, muscle form (protein)
Unique Ligands	H53, PLP

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2MS7 \| pdb_00002ms7	Download File View File

High-resolution solid-state NMR structure of the helical signal transduction filament MAVS CARD

He, L., Bardiaux, B., Spehr, J., Luehrs, T., Ritter, C.

(2016) Proc Natl Acad Sci U S A 113: E272-E281

Released	2015-09-02
Method	SOLID-STATE NMR
Organisms	Homo sapiens
Macromolecule	Mitochondrial antiviral-signaling protein (protein)

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2MS8 \| pdb_00002ms8	Download File View File

Solution NMR structure of MAVS CARD

Spehr, J., He, L., Luehrs, T., Ritter, C.

(2016) Proc Natl Acad Sci U S A 113: E272-E281

Released	2015-09-02
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Mitochondrial antiviral-signaling protein (protein)

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3DOY \| pdb_00003doy	Download File View File

Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3i

Zhang, L., He, L., Liu, X., Liu, H., Shen, X., Jiang, H.

(2009) J Med Chem 52: 2465-2481

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Helicobacter pylori
Macromolecule	(3R)-hydroxymyristoyl-acyl carrier protein dehydratase (protein)
Unique Ligands	2BE, BEN, CL

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3DOZ \| pdb_00003doz	Download File View File

Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3k

Zhang, L., He, L., Liu, X., Liu, H., Shen, X., Jiang, H.

(2009) J Med Chem 52: 2465-2481

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Helicobacter pylori
Macromolecule	(3R)-hydroxymyristoyl-acyl carrier protein dehydratase (protein)
Unique Ligands	3BE, BEN, CL

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3DP0 \| pdb_00003dp0	Download File View File

Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3m

Zhang, L., He, L., Liu, X., Liu, H., Shen, X., Jiang, H.

(2009) J Med Chem 52: 2465-2481

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Helicobacter pylori
Macromolecule	(3R)-hydroxymyristoyl-acyl carrier protein dehydratase (protein)
Unique Ligands	2BC, BEN, CL

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3DP1 \| pdb_00003dp1	Download File View File

Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3n

Zhang, L., He, L., Liu, X., Liu, H., Shen, X., Jiang, H.

(2009) J Med Chem 52: 2465-2481

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Helicobacter pylori
Macromolecule	(3R)-hydroxymyristoyl-acyl carrier protein dehydratase (protein)
Unique Ligands	2RB, BEN, CL

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3DP2 \| pdb_00003dp2	Download File View File

Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3j

Zhang, L., He, L., Liu, X., Liu, H., Shen, X., Jiang, H.

(2009) J Med Chem 52: 2465-2481

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Helicobacter pylori
Macromolecule	(3R)-hydroxymyristoyl-acyl carrier protein dehydratase (protein)
Unique Ligands	4BE, BEN, CL

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3DP3 \| pdb_00003dp3	Download File View File

Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3q

Zhang, L., He, L., Liu, X., Liu, H., Shen, X., Jiang, H.

(2009) J Med Chem 52: 2465-2481

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Helicobacter pylori
Macromolecule	(3R)-hydroxymyristoyl-acyl carrier protein dehydratase (protein)
Unique Ligands	4BB, BEN, CL

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3Q8T \| pdb_00003q8t	Download File View File

Crystal structure of the coiled coil domain of Beclin 1, an essential autophagy protein

Li, X., Zhao, Y.

(2012) Nat Commun 3: 662-662

Released	2012-01-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Beclin-1 (protein)

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3SJQ \| pdb_00003sjq	Download File View File

Crystal structure of a small conductance potassium channel splice variant complexed with calcium-calmodulin

Zhang, M., Pascal, J.M., Zhang, J.-F.

(2012) Structure 20: 911-923

Released	2012-05-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Calmodulin (protein) Small conductance calcium-activated potassium channel protein 2 (protein)
Unique Ligands	CA, GOL, PHU, SO4

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3WSQ \| pdb_00003wsq	Download File View File

Structure of HER2 with an Fab

Fu, W.Y., Wang, Y.X., Zhou, L.J.

(2014) MAbs 6: 978-990

Released	2015-03-25
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens
Macromolecule	Antibody Heavy Chain (protein) Antibody Light Chain (protein) Receptor tyrosine-protein kinase erbB-2 (protein)

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4MD6 \| pdb_00004md6	Download File View File

Crystal structure of PDE5 in complex with inhibitor 5R

Cui, W., Huang, M., Shao, Y., Luo, H.

(2014) Biochem Pharmacol 89: 86-98

Released	2014-07-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	cGMP-specific 3',5'-cyclic phosphodiesterase (protein)
Unique Ligands	24E, MG, SO4, ZN

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5CD3 \| pdb_00005cd3	Download File View File

Structure of immature VRC01-class antibody DRVIA7

Kong, L., Wilson, I.A.

(2016) Immunity 44: 939-950

Released	2016-04-06
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	DRVIA7 Heavy Chain (protein) DRVIA7 Light Chain (protein)

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5CD5 \| pdb_00005cd5	Download File View File

Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core

Kong, L., Wilson, I.A.

(2016) Immunity 44: 939-950

Released	2016-04-06
Method	X-RAY DIFFRACTION 3.396 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	93TH057 HIV-1 gp120 core (protein) DRVIA7 Fab Heavy Chain (protein) DRVIA7 Fab Light Chain (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5JS9 \| pdb_00005js9	Download File View File

Uncleaved prefusion optimized gp140 trimer with an engineered 8-residue HR1 turn bound to broadly neutralizing antibodies 8ANC195 and PGT128

Kong, L., Wilson, I.A.

(2016) Nat Commun 7: 12040-12040

Released	2016-07-13
Method	X-RAY DIFFRACTION 6.918 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5JSA \| pdb_00005jsa	Download File View File

Uncleaved prefusion optimized gp140 trimer with an engineered 10-residue HR1 turn bound to broadly neutralizing antibodies 8ANC195 and PGT128

Kong, L., Wilson, I.A.

(2016) Nat Commun 7: 12040-12040

Released	2016-07-13
Method	X-RAY DIFFRACTION 6.308 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	Unique protein chains: 6
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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5Y9O \| pdb_00005y9o	Download File View File

The apo structure of Legionella pneumophila WipA

Xie, W., Jia, Q.

(2018) Acta Biochim Biophys Sin (Shanghai) 50: 547-554

Released	2018-05-16
Method	X-RAY DIFFRACTION 2.554 Å
Organisms	Legionella pneumophila
Macromolecule	WipA (protein)
Unique Ligands	IOD

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5YEI \| pdb_00005yei	Download File View File

Mechanistic insight into the regulation of Pseudomonas aeruginosa aspartate kinase

Li, C., Yang, M., Liu, L., Peng, C., Li, T., He, L., Song, Y., Zhu, Y., Bao, R.

(2018) Biochem J 475: 1107-1119

Released	2018-08-29
Method	X-RAY DIFFRACTION 2.301 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Aspartokinase (protein)
Unique Ligands	GOL, LYS, THR

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5YFE \| pdb_00005yfe	Download File View File

Enzymatic and structural characterization of the poly (ethylene terephthalate) hydrolase PETase from I. sakaiensis

Bao, R., He, L.H., Liu, B.

(2018) Chembiochem

Released	2018-09-26
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Piscinibacter sakaiensis
Macromolecule	Poly(ethylene terephthalate) hydrolase (protein)
Unique Ligands	GOL, SO4

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5YQZ \| pdb_00005yqz	Download File View File

Structure of the glucagon receptor in complex with a glucagon analogue

Zhang, H., Qiao, A., Yang, L., VAN EPS, N., Frederiksen, K., Yang, D., Dai, A., Cai, X., Zhang, H., Yi, C., Can, C., He, L., Yang, H., Lau, J., Ernst, O., Hanson, M., Stevens, R., Wang, M., Seedtz-Runge, S., Jiang, H., Zhao, Q., Wu, B.

(2018) Nature 553: 106-110

Released	2018-01-17
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens Tequatrovirus T4
Macromolecule	Glucagon analogue (protein) Glucagon receptor,Endolysin,Glucagon receptor (protein)
Unique Ligands	OLC, PO4
Unique branched monosaccharides	NAG