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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Harmange, J.C."

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Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

Homo sapiens (40)

Taxonomy

Eukaryota (40)

Experimental Method

X-RAY DIFFRACTION (40)

Polymer Entity Type

Protein (40)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (11)
	2.0 - 2.5 (9)
	2.5 - 3.0 (9)
	3.0 - 3.5 (6)

Release Date

	2005 - 2009 (8)
	2010 - 2014 (9)
	2015 - 2019 (17)
	2020 - 2024 (6)

Enzyme Classification Name

	Transferases (27)
	Oxidoreductases (5)

Symmetry Type

	Asymmetric (38)
	Cyclic (2)

SCOP Classification

	Alpha and beta proteins (a+b) (20)
	All alpha proteins (9)
	Artifacts (7)
	All beta proteins (3)

AllSelected

1 to 25 of 40 Structures

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2QU5 \| pdb_00002qu5	Download File View File

Crystal structure of the VEGFR2 kinase domain in complex with a benzimidazole inhibitor

Whittington, D.A., Kim, J.L., Long, A.M., Rose, P., Gu, Y., Zhao, H.

(2007) J Med Chem 50: 4351-4373

Released	2007-09-25
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Homo sapiens
Macromolecule	Vascular endothelial growth factor receptor 2 (protein)
Unique Ligands	276

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2QU6 \| pdb_00002qu6	Download File View File

Crystal structure of the VEGFR2 kinase domain in complex with a benzoxazole inhibitor

Whittington, D.A., Kim, J.L., Long, A.M., Rose, P., Gu, Y., Zhao, H.

(2007) J Med Chem 50: 4351-4373

Released	2007-09-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Vascular endothelial growth factor receptor 2 (protein)
Unique Ligands	857, SO4

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2RL5 \| pdb_00002rl5	Download File View File

Crystal structure of the VEGFR2 kinase domain in complex with a 2,3-dihydro-1,4-benzoxazine inhibitor

Whittington, D.A., Long, A.M., Rose, P., Zhao, H.

(2008) J Med Chem 51: 1695-1705

Released	2008-04-08
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Vascular endothelial growth factor receptor 2 (protein)
Unique Ligands	2RL

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3B8Q \| pdb_00003b8q	Download File View File

Crystal structure of the VEGFR2 kinase domain in complex with a naphthamide inhibitor

Whittington, D.A., Long, A.M., Gu, Y., Zhao, H.

(2008) J Med Chem 51: 1649-1667

Released	2008-04-01
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Homo sapiens
Macromolecule	Vascular endothelial growth factor receptor 2 (protein)
Unique Ligands	900

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3B8R \| pdb_00003b8r	Download File View File

Crystal structure of the VEGFR2 kinase domain in complex with a naphthamide inhibitor

Whittington, D.A., Long, A.M., Gu, Y., Zhao, H.

(2008) J Med Chem 51: 1668-1680

Released	2008-04-01
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Vascular endothelial growth factor receptor 2 (protein)
Unique Ligands	887, EDO

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3BE2 \| pdb_00003be2	Download File View File

Crystal structure of the VEGFR2 kinase domain in complex with a benzamide inhibitor

Whittington, D.A., Kim, J.L., Long, A.M., Gu, Y., Rose, P., Zhao, H.

(2008) J Med Chem 51: 1649-1667

Released	2008-04-08
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Vascular endothelial growth factor receptor 2 (protein)
Unique Ligands	RAJ

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3CCN \| pdb_00003ccn	Download File View File

X-ray structure of c-Met with triazolopyridazine inhibitor.

Abrecht, B.K., Harmange, J.-C., Bauer, D., Dussault, I., long, A., Bellon, S.F.

(2008) J Med Chem 51: 2879-2882

Released	2008-04-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	LKG

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3CD8 \| pdb_00003cd8	Download File View File

X-ray Structure of c-Met with triazolopyridazine Inhibitor.

Bellon, S.F., Albrecht, B.K., Harmange, J.-C., Bauer, D., Choquette, D., Dussault, I.

(2008) J Med Chem 51: 2879-2882

Released	2008-04-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	L5G

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3I5N \| pdb_00003i5n	Download File View File

Crystal structure of c-Met with triazolopyridazine inhibitor 13

Bellon, S.F., Whittington, D.A., Long, A.M., Boezio, A.A.

(2009) Bioorg Med Chem Lett 19: 6307-6312

Released	2010-01-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	B2D

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3QAQ \| pdb_00003qaq	Download File View File

Crystal structure of PI3K-gamma in complex with triazine-benzimidazole 1

Whittington, D.A., Tang, J., Yakowec, P.

(2011) Bioorg Med Chem Lett 21: 2064-2070

Released	2011-03-30
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform (protein)
Unique Ligands	QAQ, SO4

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3QAR \| pdb_00003qar	Download File View File

Crystal structure of PI3K-gamma in complex with triazine-benzimidazole 32

Whittington, D.A., Tang, J., Yakowec, P.

(2011) Bioorg Med Chem Lett 21: 2064-2070

Released	2011-03-30
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform (protein)
Unique Ligands	QAR, SO4

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3QQU \| pdb_00003qqu	Download File View File

Cocrystal structure of unphosphorylated igf with pyrimidine 8

Huang, X.

(2011) Bioorg Med Chem Lett 21: 2394-2399

Released	2011-04-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Insulin-like growth factor 1 receptor (protein)
Unique Ligands	01P

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4DEG \| pdb_00004deg	Download File View File

Crystal structure of c-Met in complex with triazolopyridazine inhibitor 2

Whittington, D.A., Bellon, S.F., Long, A.M.

(2012) Bioorg Med Chem Lett 22: 4089-4093

Released	2012-05-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	0JJ

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4DEH \| pdb_00004deh	Download File View File

Crystal structure of c-Met in complex with triazolopyridinone inhibitor 3

Whittington, D.A., Bellon, S.F., Long, A.M.

(2012) Bioorg Med Chem Lett 22: 4089-4093

Released	2012-05-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	0JK

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4DEI \| pdb_00004dei	Download File View File

Crystal structure of c-Met in complex with triazolopyridinone inhibitor 24

Whittington, D.A., Long, A.M.

(2012) Bioorg Med Chem Lett 22: 4089-4093

Released	2012-05-30
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	0JL

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4LR6 \| pdb_00004lr6	Download File View File

Structure of BRD4 bromodomain 1 with a 3-methyl-4-phenylisoxazol-5-amine fragment

Jayaram, H., Poy, F., Gehling, V., Hewitt, M., Vaswani, R., Leblanc, Y., Cote, A., Nasveschuk, C., Taylor, A., Harmange, J.-C., Audia, J., Pardo, E., Joshi, S., Sandy, P., Mertz, J., Sims, R., Bergeron, L., Bryant, B., Ravichandran, S., Yellapuntala, S., Nandana, B.S., Birudukota, S., Albrecht, B., Bellon, S.

(2013) ACS Med Chem Lett 4: 835-840

Released	2013-08-07
Method	X-RAY DIFFRACTION 1.29 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	1XA, FMT

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4LRG \| pdb_00004lrg	Download File View File

Structure of BRD4 bromodomain 1 with a dimethyl thiophene isoxazole azepine carboxamide

Ravichandran, S., Jayaram, H., Poy, F., Gehling, V., Hewitt, M., Vaswani, R., Leblanc, Y., Cote, A., Nasveschuk, C., Taylor, A., Harmange, J.-C., Audia, J., Pardo, E., Joshi, S., Sandy, P., Mertz, J., Sims, R., Bergeron, L., Bryant, B., Yellapuntala, S., Nandana, B.S., Birudukota, S., Albrecht, B., Bellon, S.

(2013) ACS Med Chem Lett 4: 835-840

Released	2013-08-07
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	1XB

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4X2I \| pdb_00004x2i	Download File View File

Discovery of benzotriazolo diazepines as orally-active inhibitors of BET bromodomains: Crystal structure of BRD4 with CPI-13

Bellon, S.F., Jayaram, H., Poy, F.

(2016) ACS Med Chem Lett 7: 145-150

Released	2015-11-11
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	3X0, FMT

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4XMO \| pdb_00004xmo	Download File View File

Crystal structure of c-Met in complex with (R)-5-(8-fluoro-3-(1-fluoro-1-(3-methoxyquinolin-6-yl)ethyl)-[1,2,4]triazolo[4,3-a]pyridin-6-yl)-3-methylisoxazole

Whittington, D.A., Long, A.M.

(2015) J Med Chem 58: 2417-2430

Released	2015-03-11
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	46G

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4XYF \| pdb_00004xyf	Download File View File

Crystal structure of c-Met in complex with (S)-5-(8-fluoro-3-(1-(3-(2-methoxyethoxy)quinolin-6-yl)ethyl)-[1,2,4]triazolo[4,3-a]pyridin-6-yl)-3-methylisoxazole

Whittington, D.A., Long, A.M.

(2015) J Med Chem 58: 2417-2430

Released	2015-03-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Hepatocyte growth factor receptor (protein)
Unique Ligands	44X

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4YK0 \| pdb_00004yk0	Download File View File

Crystal structure of the CBP bromodomain in complex with CPI098

Bellon, S.F., Jayaram, H.

(2016) J Biological Chem 291: 13014-13027

Released	2016-04-20
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	CREB-binding protein (protein)
Unique Ligands	986, EDO

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4Z1Q \| pdb_00004z1q	Download File View File

Crystal structure of the first bromodomain of human BRD4 bound to benzotriazolo-diazepine scaffold

Setser, J.W., Poy, F., Tang, Y., Bellon, S.F.

(2016) ACS Med Chem Lett 7: 145-150

Released	2015-04-08
Method	X-RAY DIFFRACTION 1.399 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	558

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4Z1S \| pdb_00004z1s	Download File View File

Crystal structure of the first bromodomain of human BRD4 with benzotriazolo-diazepine scaffold

Setser, J.W., Poy, F., Tang, Y., Bellon, S.F.

(2016) ACS Med Chem Lett 7: 145-150

Released	2015-04-08
Method	X-RAY DIFFRACTION 1.06 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein)
Unique Ligands	559

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5CEH \| pdb_00005ceh	Download File View File

Structure of histone lysine demethylase KDM5A in complex with selective inhibitor

Kiefer, J.R., Vinogradova, M.

(2016) Nat Chem Biol 12: 531-538

Released	2016-05-18
Method	X-RAY DIFFRACTION 3.14 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific demethylase 5A (protein) Unknown Peptide (protein)
Unique Ligands	50P, NI, ZN