RCSB PDB: Search

(2014) J Med Chem 57: 4351-4367

Released	2014-06-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Mediator of RNA polymerase II transcription subunit 1 (protein) Vitamin D3 receptor (protein)
Unique Ligands	YA1

3WT6 \| pdb_00003wt6	Download File View File

A mixed population of antagonist and agonist binding conformers in a single crystal explains partial agonism against vitamin D receptor: Active vitamin D analogues with 22R-alkyl group

(2014) J Med Chem 57: 4351-4367

Released	2014-06-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Mediator of RNA polymerase II transcription subunit 1 (protein) Vitamin D3 receptor (protein)
Unique Ligands	YA1

3WT7 \| pdb_00003wt7	Download File View File

Crystal structure of VDR-LBD complexed with 22R-Butyl-2-methylidene-26,27-dimethyl-19,24-dinor-1 ,25-dihydroxyvitamin D3

(2014) J Med Chem 57: 4351-4367

Released	2014-06-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Mediator of RNA polymerase II transcription subunit 1 (protein) Vitamin D3 receptor (protein)
Unique Ligands	YA2

3X1H \| pdb_00003x1h	Download File View File

hPPARgamma Ligand binding domain in complex with 5-oxo-tricosahexaenoic acid

(2015) Bioconjug Chem 26: 690-698

Released	2015-04-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	5OX

3X1I \| pdb_00003x1i	Download File View File

hPPARgamma Ligand binding domain in complex with 6-oxo-tetracosahexaenoic acid

(2015) Bioconjug Chem 26: 690-698

Released	2015-04-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	66B

5AZT \| pdb_00005azt	Download File View File

Ternary complex of hPPARalpha ligand binding domain, 17-oxoDHA and a SRC1 peptide

(2016) ACS Chem Biol

Released	2016-07-06
Method	X-RAY DIFFRACTION 3.45 Å
Organisms	Homo sapiens
Macromolecule	15-meric peptide from Nuclear receptor coactivator 1 (protein) Peroxisome proliferator-activated receptor alpha (protein)
Unique Ligands	4M5

5AZV \| pdb_00005azv	Download File View File

Crystal structure of hPPARgamma ligand binding domain complexed with 17-oxoDHA

(2016) ACS Chem Biol

Released	2016-07-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	4M5

5B41 \| pdb_00005b41	Download File View File

Crystal structure of VDR-LBD complexed with 2-methylidene-19-nor-1a,25-dihydroxyvitamin D3

(2016) J Med Chem 59: 7888-7900

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Mediator of RNA polymerase II transcription subunit 1 (protein) Vitamin D3 receptor (protein)
Unique Ligands	YSV

5B5B \| pdb_00005b5b	Download File View File

Crystal structure of VDR-LBD complexed with 2-methylidene-26,27-diphenyl-19-nor-1,25-dihydroxyvitamin D3

Kato, A., Itoh, T., Yamamoto, K.

(2016) Bioconjug Chem 27: 1750-1761

Released	2016-06-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Mediator of RNA polymerase II transcription subunit 1 (protein) Vitamin D3 receptor (protein)
Unique Ligands	AKX

5H1E \| pdb_00005h1e	Download File View File

Interaction between vitamin D receptor and coactivator peptide SRC2-3

Egawa, D., Itoh, T., Kato, A., Kataoka, S., Anami, Y., Yamamoto, K.

(2017) Bioorg Med Chem 25: 568-574

Released	2017-01-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	Nuclear receptor coactivator 2 peptide (protein) Vitamin D3 receptor (protein)
Unique Ligands	VDX

5ZYG \| pdb_00005zyg	Download File View File

Crystal structure of CERT START domain in complex with compound B5

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9N3

5ZYH \| pdb_00005zyh	Download File View File

Crystal structure of CERT START domain in complex with compound E5

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9N0

5ZYI \| pdb_00005zyi	Download File View File

Crystal structure of CERT START domain in complex with compound E16

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9ML

5ZYJ \| pdb_00005zyj	Download File View File

Crystal structure of CERT START domain in complex with compound E16A

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9ML, GOL

5ZYK \| pdb_00005zyk	Download File View File

Crystal structure of CERT START domain in complex with compound E25

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9MC

5ZYL \| pdb_00005zyl	Download File View File

Crystal structure of CERT START domain in complex with compound E25A

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9MC, GOL

5ZYM \| pdb_00005zym	Download File View File

Crystal structure of CERT START domain in complex with compound E25B

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	9M6, GOL

6IEZ \| pdb_00006iez	Download File View File

Crystal structure of CERT START domain in complex with compound B16

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	A50

6IF0 \| pdb_00006if0	Download File View File

Crystal structure of CERT START domain in complex with compound D16

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	A59

6J0O \| pdb_00006j0o	Download File View File

Crystal structure of CERT START domain in complex with compound SC1

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	UNX, XAF

6J81 \| pdb_00006j81	Download File View File

Crystal structure of CERT START domain in complex with compound E14

Suzuki, M., Nakao, N., Ueno, M., Sakai, S., Egawa, D., Hanzawa, H., Kawasaki, S., Kumagai, K., Kobayashi, S., Hanada, K.

(2019) Commun Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	LIPID-TRANSFER PROTEIN CERT (protein)
Unique Ligands	B8X

7E2O \| pdb_00007e2o	Download File View File

X-ray Crystal structure of PPARgamma R288H mutant.

Egawa, D., Itoh, T.

(2021) Biol Pharm Bull 44: 1196-1201

Released	2022-01-19
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)

8HHP \| pdb_00008hhp	Download File View File

Crystal structure of PPARg-LBD complexed with three partial agonists, one nTZDpa and two LT175

Kojima, H., Itoh, T.

(2023) J Med Chem 66: 4827-4839

Released	2023-11-22
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma (protein)
Unique Ligands	LRG, NZA