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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Clairfeuille, T."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Homo sapiens (8)
	Acinetobacter baylyi ADP1 (7)
	Rattus norvegicus (6)
	Mus musculus (2)
	Periplaneta americana (2)
	Androctonus australis (1)
	Escherichia coli (1)

Taxonomy

	Eukaryota (10)
	Bacteria (8)

Experimental Method

	ELECTRON MICROSCOPY (10)
	X-RAY DIFFRACTION (8)

Polymer Entity Type

Protein (18)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (2)
	1.5 - 2.0 (1)
	2.0 - 2.5 (2)
	2.5 - 3.0 (2)
	3.0 - 3.5 (7)
	3.5 - 4.0 (2)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (8)
	2020 - 2024 (9)

Enzyme Classification Name

Transferases (1)

Membrane Protein Annotation

	PDBTM (11)
	mpstruc (11)
	OPM (4)
	MemProtMD (3)

Symmetry Type

	Asymmetric (17)
	Cyclic (1)

SCOP Classification

	All beta proteins (1)
	Artifacts (1)

AllSelected

1 to 18 of 18 Structures

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4P2A \| pdb_00004p2a	Download File View File

Structure of mouse VPS26A bound to rat SNX27 PDZ domain

Clairfeuille, T., Gallon, M., Mas, C., Ghai, R., Teasdale, R., Cullen, P., Collins, B.

(2014) Proc Natl Acad Sci U S A 111: e3604

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus Rattus norvegicus
Macromolecule	Sorting nexin-27 (protein) Vacuolar protein sorting-associated protein 26A (protein)
Unique Ligands	HG

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4YMR \| pdb_00004ymr	Download File View File

Crystal structure of the domain swapped PXB/TPR domain of mouse SNX21

Collins, B.C., Teasdale, R.D., Clairfeuille, T.

(2015) J Biological Chem 290: 14504-14517

Released	2015-04-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mus musculus
Macromolecule	Protein Snx21 (protein)

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4Z8J \| pdb_00004z8j	Download File View File

Crystal structure of the SNX27 PDZ domain bound to the C-terminal PTHR PDZ binding motif

Clairfeuille, T., Pavlos, N., Collins, B.M.

To be published

Released	2016-02-24
Method	X-RAY DIFFRACTION 0.95 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	C-terminal PDZ binding motif from parathyroid hormone receptor (PTHR) (protein) Sorting nexin-27 (protein)

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5ELQ \| pdb_00005elq	Download File View File

Crystal structure of the SNX27 PDZ domain bound to the C-terminal DGKzeta PDZ binding motif

Collins, B.M., Clairfeuille, T.

(2016) Nat Struct Mol Biol 23: 921-932

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	GLU-ASP-GLN-GLU-THR-ALA-VAL (protein) Sorting nexin-27 (protein)
Unique Ligands	PG4

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5EM9 \| pdb_00005em9	Download File View File

Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal 5HT4(a)R PDZ binding motif

Collins, B.M., Clairfeuille, T.

(2016) Nat Struct Mol Biol 23: 921-932

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	SEP-LEU-GLU-SER-CYS-PHE (protein) Sorting nexin-27 (protein)

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5EMA \| pdb_00005ema	Download File View File

Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal LRRC3B PDZ binding motif

Collins, B.M., Clairfeuille, T.

(2016) Nat Struct Mol Biol 23: 921-932

Released	2016-09-07
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	ASP-ASP-ILE-SEP-THR-VAL-VAL (protein) Sorting nexin-27 (protein)
Unique Ligands	GOL

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5EMB \| pdb_00005emb	Download File View File

Crystal structure of the SNX27 PDZ domain bound to the C-terminal phosphorylated PTHR PDZ binding motif

Collins, B.M., Clairfeuille, T.

(2016) Nat Struct Mol Biol 23: 921-932

Released	2016-09-07
Method	X-RAY DIFFRACTION 0.85 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	GLU-GLU-TRP-SEP-THR-VAL-MET (protein) Sorting nexin-27 (protein)

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6NT3 \| pdb_00006nt3	Download File View File

Cryo-EM structure of a human-cockroach hybrid Nav channel.

Clairfeuille, T., Rohou, A., Payandeh, J.

(2019) Science

Released	2019-02-20
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens Periplaneta americana
Macromolecule	Sodium channel protein type 9 subunit alpha, Sodium channel protein PaFPC1, chimeric construct (protein)
Unique Ligands	76F, AJP, LHG, NAG, Y01
Unique branched monosaccharides	BMA, NAG

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6NT4 \| pdb_00006nt4	Download File View File

Cryo-EM structure of a human-cockroach hybrid Nav channel bound to alpha-scorpion toxin AaH2.

Clairfeuille, T., Rohou, A., Payandeh, J.

(2019) Science 363:

Released	2019-02-20
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Androctonus australis Homo sapiens Periplaneta americana
Macromolecule	Alpha-mammal toxin AaH2 (protein) Sodium channel protein PaFPC1,Sodium channel protein type 9 subunit alpha,Sodium channel protein PaFPC1 (protein)
Unique Ligands	76F, AJP, LHG, NAG, Y01
Unique branched monosaccharides	BMA, NAG

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6XIW \| pdb_00006xiw	Download File View File

Cryo-EM structure of the sodium leak channel NALCN-FAM155A complex

Kschonsak, M., Chua, H.C., Noland, C.L., Weidling, C., Clairfeuille, T., Bahlke, O.O., Ameen, A.O., Li, Z.R., Arthur, C.P., Ciferri, C., Pless, S.A., Payandeh, J.

(2020) Nature 587: 313-318

Released	2020-07-29
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Homo sapiens
Macromolecule	Sodium leak channel non-selective protein (protein) Transmembrane protein FAM155A (protein)
Unique Ligands	NAG, PEV, PGV, Y01

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6XLP \| pdb_00006xlp	Download File View File

Structure of the essential inner membrane lipopolysaccharide-PbgA complex

Payandeh, J., Clairefeuille, T.

(2020) Nature 584: 479-483

Released	2020-08-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	LPS binding protein (protein)
Unique Ligands	3PE, OLB, PG4, SO4
Unique branched monosaccharides	KDO, VJ1, VJ4

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8FRL \| pdb_00008frl	Download File View File

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide

Pahil, K.S., Gilman, M.S.A., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein)
Unique Ligands	JSG, LMT, Y75

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8FRM \| pdb_00008frm	Download File View File

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide.

Pahil, K.S., Gilman, M.S.A., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.14 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein)
Unique Ligands	JSG

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8FRN \| pdb_00008frn	Download File View File

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and Zosurabalpin

Pahil, K.S., Gilman, M.S.A., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein)
Unique Ligands	JSG, LMT, VB6

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8FRO \| pdb_00008fro	Download File View File

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide

Pahil, K.S., Gilman, M.S.A., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.25 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein)
Unique Ligands	JSG, MG3

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8FRP \| pdb_00008frp	Download File View File

Acinetobacter baylyi LptB2FGC

Pahil, K.S., Gilman, M.S.A., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein) Lipopolysaccharide export system protein LptC (protein)

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8UFG \| pdb_00008ufg	Download File View File

Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide

Pahil, K.S., Gilman, M.S.A., Baidin, V., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein)
Unique Ligands	LMT, WJR

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8UFH \| pdb_00008ufh	Download File View File

Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide and a macrocyclic peptide

Pahil, K.S., Gilman, M.S.A., Baidin, V., Kruse, A.C., Kahne, D.

(2024) Nature 625: 572-577

Released	2024-01-03
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Acinetobacter baylyi ADP1
Macromolecule	LPS export ABC transporter permease LptG (protein) Lipopolysaccharide export system ATP-binding protein LptB (protein) Lipopolysaccharide export system permease protein LptF (protein)
Unique Ligands	WJW, Y75

1 to 18 of 18 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4P2A | pdb_00004p2a

Structure of mouse VPS26A bound to rat SNX27 PDZ domain

4YMR | pdb_00004ymr

Crystal structure of the domain swapped PXB/TPR domain of mouse SNX21

4Z8J | pdb_00004z8j

Crystal structure of the SNX27 PDZ domain bound to the C-terminal PTHR PDZ binding motif

5ELQ | pdb_00005elq

Crystal structure of the SNX27 PDZ domain bound to the C-terminal DGKzeta PDZ binding motif

5EM9 | pdb_00005em9

Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal 5HT4(a)R PDZ binding motif

5EMA | pdb_00005ema

Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal LRRC3B PDZ binding motif

5EMB | pdb_00005emb

Crystal structure of the SNX27 PDZ domain bound to the C-terminal phosphorylated PTHR PDZ binding motif

6NT3 | pdb_00006nt3

Cryo-EM structure of a human-cockroach hybrid Nav channel.

6NT4 | pdb_00006nt4

Cryo-EM structure of a human-cockroach hybrid Nav channel bound to alpha-scorpion toxin AaH2.

6XIW | pdb_00006xiw

Cryo-EM structure of the sodium leak channel NALCN-FAM155A complex

6XLP | pdb_00006xlp

Structure of the essential inner membrane lipopolysaccharide-PbgA complex

8FRL | pdb_00008frl

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide

8FRM | pdb_00008frm

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide.

8FRN | pdb_00008frn

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and Zosurabalpin

8FRO | pdb_00008fro

Acinetobacter baylyi LptB2FG bound to lipopolysaccharide and a macrocyclic peptide

8FRP | pdb_00008frp

Acinetobacter baylyi LptB2FGC

8UFG | pdb_00008ufg

Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide

8UFH | pdb_00008ufh

Acinetobacter baylyi LptB2FG bound to Acinetobacter baylyi lipopolysaccharide and a macrocyclic peptide

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

4P2A | pdb_00004p2a

4YMR | pdb_00004ymr

4Z8J | pdb_00004z8j

5ELQ | pdb_00005elq

5EM9 | pdb_00005em9

5EMA | pdb_00005ema

5EMB | pdb_00005emb

6NT3 | pdb_00006nt3

6NT4 | pdb_00006nt4

6XIW | pdb_00006xiw

6XLP | pdb_00006xlp

8FRL | pdb_00008frl

8FRM | pdb_00008frm

8FRN | pdb_00008frn

8FRO | pdb_00008fro

8FRP | pdb_00008frp

8UFG | pdb_00008ufg

8UFH | pdb_00008ufh