RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Heidler, T.V."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Shigella flexneri (4)
	Yersinia pseudotuberculosis (4)
	Homo sapiens (3)
	Porphyromonas gingivalis ATCC 33277 (2)

Taxonomy

	Bacteria (10)
	Eukaryota (3)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (4)
	2020 - 2024 (6)

Enzyme Classification Name

Hydrolases (3)

Membrane Protein Annotation

OPM (1)

Symmetry Type

Asymmetric (10)

SCOP Classification

	Alpha and beta proteins (a/b) (3)
	Artifacts (3)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 10 of 10 Structures

Page 1 of 1

Sort by

Explore in 3D

3LW8 \| pdb_00003lw8	Download File View File

Shigella IpgB2 in complex with human RhoA, GDP and Mg2+ (complex A)

Klink, B.U., Barden, S., Heidler, T.V., Borchers, C., Ladwein, M., Stradal, T.E.B., Rottner, K., Heinz, D.W.

(2010) J Biological Chem 285: 17197-17208

Released	2010-03-31
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens Shigella flexneri
Macromolecule	IpgB2 (protein) Transforming protein RhoA (protein)
Unique Ligands	GDP, MG

Explore in 3D

3LWN \| pdb_00003lwn	Download File View File

Shigella IpgB2 in complex with human RhoA, GDP and Mg2+ (complex B)

Klink, B.U., Barden, S., Heidler, T.V., Borchers, C., Ladwein, M., Stradal, T.E.B., Rottner, K., Heinz, D.W.

(2010) J Biological Chem 285: 17197-17208

Released	2010-03-31
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Homo sapiens Shigella flexneri
Macromolecule	IpgB2 (protein) Transforming protein RhoA (protein)
Unique Ligands	GDP, MG

Explore in 3D

3LXR \| pdb_00003lxr	Download File View File

Shigella IpgB2 in complex with human RhoA and GDP (complex C)

Klink, B.U., Barden, S., Heidler, T.V., Borchers, C., Ladwein, M., Stradal, T.E.B., Rottner, K., Heinz, D.W.

(2010) J Biological Chem 285: 17197-17208

Released	2010-03-31
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Homo sapiens Shigella flexneri
Macromolecule	IpgB2 (protein) Transforming protein RhoA (protein)
Unique Ligands	GDP, SO4

Explore in 3D

3LYQ \| pdb_00003lyq	Download File View File

Crystal structure of IpgB2 from Shigella flexneri

Klink, B.U., Barden, S., Heidler, T.V., Borchers, C., Ladwein, M., Stradal, T.E.B., Rottner, K., Heinz, D.W.

(2010) J Biological Chem 285: 17197-17208

Released	2010-03-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Shigella flexneri
Macromolecule	IpgB2 (protein)
Unique Ligands	FEO, FLC

Explore in 3D

6TNJ \| pdb_00006tnj	Download File View File

Crystal structure of the vWF domain of the type V pili tip protein Mfa5 from Porphyromonas gingivalis

Heidler, T.V., Claesson, R., Persson, K.

(2021) Commun Biol 4: 106-106

Released	2020-12-02
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Porphyromonas gingivalis ATCC 33277
Macromolecule	Minor fimbrium subunit Mfa5 (protein)
Unique Ligands	CA, MPO

Explore in 3D

6TO1 \| pdb_00006to1	Download File View File

Crystal structure of three N-terminal domains of the type V pili tip protein Mfa5 from Porphyromonas gingivalis

Persson, K., Heidler, T.V.

(2021) Commun Biol 4: 106-106

Released	2020-12-02
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Porphyromonas gingivalis ATCC 33277
Macromolecule	Minor fimbrium subunit Mfa5 (protein)
Unique Ligands	CA, MG, PO4

Explore in 3D

6YHK \| pdb_00006yhk	Download File View File

Crystal structure of full-length CNFy (C866S) from Yersinia pseudotuberculosis

Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.

(2021) EMBO J 40: e105202-e105202

Released	2020-12-30
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	Cytotoxic necrotizing factor (protein)
Unique Ligands	CL, SO4

Explore in 3D

6YHL \| pdb_00006yhl	Download File View File

Crystal structure of CNFy from Yersinia pseudotuberculosis - N-terminal fragment comprising residues 1-704

Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.

(2021) EMBO J 40: e105202-e105202

Released	2020-12-30
Method	X-RAY DIFFRACTION 3.277 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	Cytotoxic necrotizing factor (protein)

Explore in 3D

6YHM \| pdb_00006yhm	Download File View File

Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis

Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.

(2021) EMBO J 40: e105202-e105202

Released	2020-12-30
Method	X-RAY DIFFRACTION 1.13 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	Cytotoxic necrotizing factor (protein)
Unique Ligands	MG

Explore in 3D

6YHN \| pdb_00006yhn	Download File View File

Crystal structure of domains 4-5 of CNFy from Yersinia pseudotuberculosis

Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.

(2021) EMBO J 40: e105202-e105202

Released	2020-12-30
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	Cytotoxic necrotizing factor (protein)
Unique Ligands	BU3, CL, MG, NA, SO4

1 to 10 of 10 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3LW8 | pdb_00003lw8

Shigella IpgB2 in complex with human RhoA, GDP and Mg2+ (complex A)

3LWN | pdb_00003lwn

Shigella IpgB2 in complex with human RhoA, GDP and Mg2+ (complex B)

3LXR | pdb_00003lxr

Shigella IpgB2 in complex with human RhoA and GDP (complex C)

3LYQ | pdb_00003lyq

Crystal structure of IpgB2 from Shigella flexneri

6TNJ | pdb_00006tnj

Crystal structure of the vWF domain of the type V pili tip protein Mfa5 from Porphyromonas gingivalis

6TO1 | pdb_00006to1

Crystal structure of three N-terminal domains of the type V pili tip protein Mfa5 from Porphyromonas gingivalis

6YHK | pdb_00006yhk

Crystal structure of full-length CNFy (C866S) from Yersinia pseudotuberculosis

6YHL | pdb_00006yhl

Crystal structure of CNFy from Yersinia pseudotuberculosis - N-terminal fragment comprising residues 1-704

6YHM | pdb_00006yhm

Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis

6YHN | pdb_00006yhn

Crystal structure of domains 4-5 of CNFy from Yersinia pseudotuberculosis

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

3LW8 | pdb_00003lw8

3LWN | pdb_00003lwn

3LXR | pdb_00003lxr

3LYQ | pdb_00003lyq

6TNJ | pdb_00006tnj

6TO1 | pdb_00006to1

6YHK | pdb_00006yhk

6YHL | pdb_00006yhl

6YHM | pdb_00006yhm

6YHN | pdb_00006yhn