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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Botuyan, M.V."

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Search Summary

This query matches 70 Structures.

Refinements

Structure Determination Methodology

experimental (70)

Scientific Name of Source Organism

	Homo sapiens (64)
	Saccharomyces cerevisiae S288C (3)
	Acidithiobacillus ferrooxidans (1)
	Lama glama (1)
	Mus musculus (1)
	Saccharomyces cerevisiae (1)
	Schizosaccharomyces pombe (1)

Taxonomy

	Eukaryota (69)
	Eukaryota (eukaryotes) (2)
	Bacteria (1)

Experimental Method

	X-RAY DIFFRACTION (34)
	ELECTRON MICROSCOPY (25)
	SOLUTION NMR (11)

Polymer Entity Type

	Protein (70)
	DNA (24)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (11)
	2.0 - 2.5 (12)
	2.5 - 3.0 (5)
	3.0 - 3.5 (10)
	3.5 - 4.0 (16)
	4.0 - 4.5 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (1)
	2005 - 2009 (5)
	2010 - 2014 (4)
	2015 - 2019 (18)
	2020 - 2024 (41)

Enzyme Classification Name

	Transferases (37)
	Oxidoreductases (2)
	Hydrolases (1)

Symmetry Type

	Asymmetric (60)
	Cyclic (11)

SCOP Classification

	All beta proteins (13)
	Artifacts (8)
	Alpha and beta proteins (a+b) (8)
	All alpha proteins (3)

AllSelected

1 to 25 of 70 Structures

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1CUR \| pdb_00001cur	Download File View File

REDUCED RUSTICYANIN, NMR

Botuyan, M.V., Dyson, H.J.

(1996) J Mol Biology 263: 752-767

Released	1996-11-08
Method	SOLUTION NMR
Organisms	Acidithiobacillus ferrooxidans
Macromolecule	CU(I) RUSTICYANIN (protein)
Unique Ligands	CU

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1HV2 \| pdb_00001hv2	Download File View File

SOLUTION STRUCTURE OF YEAST ELONGIN C IN COMPLEX WITH A VON HIPPEL-LINDAU PEPTIDE

Botuyan, M.V., Mer, G., Yi, G.-S., Koth, C.M., Case, D.A., Edwards, A.M., Chazin, W.J., Arrowsmith, C.H.

(2001) J Mol Biology 312: 177-186

Released	2001-09-06
Method	SOLUTION NMR
Organisms	Mus musculus Saccharomyces cerevisiae
Macromolecule	ELONGIN C (protein) VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR (protein)

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2B02 \| pdb_00002b02	Download File View File

Crystal Structure of ARNT PAS-B Domain

Lee, J., Botuyan, M.V., Nomine, Y., Ohh, M., Thompson, J.R., Mer, G.

To be published

Released	2006-10-24
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Aryl hydrocarbon receptor nuclear translocator (protein)

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2FHD \| pdb_00002fhd	Download File View File

Crystal structure of Crb2 tandem tudor domains

Lee, J., Botuyan, M.V., Thompson, J.R., Mer, G.

(2006) Cell 127: 1361-1373

Released	2007-01-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Schizosaccharomyces pombe
Macromolecule	DNA repair protein rhp9/CRB2 (protein)
Unique Ligands	PO4

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2G3R \| pdb_00002g3r	Download File View File

Crystal Structure of 53BP1 tandem tudor domains at 1.2 A resolution

Lee, J., Botuyan, M.V., Thompson, J.R., Mer, G.

(2006) Cell 127: 1361-1373

Released	2007-01-02
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Tumor suppressor p53-binding protein 1 (protein)
Unique Ligands	SO4

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2MWO \| pdb_00002mwo	Download File View File

Solution structure of 53BP1 tandem Tudor domains in complex with a p53K370me2 peptide

Cui, G., Botuyan, M.V., Mer, G.

(2015) Structure 23: 312-321

Released	2014-12-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Cellular tumor antigen p53 (protein) Tumor suppressor p53-binding protein 1 (protein)

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2MWP \| pdb_00002mwp	Download File View File

Solution structure of 53BP1 tandem Tudor domains in complex with a p53K382me2 peptide

Cui, G., Botuyan, M.V., Mer, G.

(2015) Structure 23: 312-321

Released	2014-12-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Cellular tumor antigen p53 (protein) Tumor suppressor p53-binding protein 1 (protein)

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2QQR \| pdb_00002qqr	Download File View File

JMJD2A hybrid tudor domains

Lee, J., Botuyan, M.V., Mer, G.

(2008) Nat Struct Mol Biol 15: 109-111

Released	2007-12-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing histone demethylation protein 3A (protein)
Unique Ligands	SO4

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2QQS \| pdb_00002qqs	Download File View File

JMJD2A tandem tudor domains in complex with a trimethylated histone H4-K20 peptide

Lee, J., Botuyan, M.V., Mer, G.

(2008) Nat Struct Mol Biol 15: 109-111

Released	2007-12-11
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Homo sapiens
Macromolecule	JmjC domain-containing histone demethylation protein 3A (protein) METHYLATED HISTONE H4 PEPTIDE (protein)

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3P8D \| pdb_00003p8d	Download File View File

Crystal structure of the second Tudor domain of human PHF20 (homodimer form)

Cui, G., Lee, J., Thompson, J.R., Botuyan, M.V., Mer, G.

(2012) Nat Struct Mol Biol 19: 916-924

Released	2011-06-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Medulloblastoma antigen MU-MB-50.72 (protein)

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3SD4 \| pdb_00003sd4	Download File View File

Crystal structure of the first Tudor domain of human PHF20

Cui, G., Botuyan, M.V., Thompson, J.R., Mer, G.

(2012) Nat Struct Mol Biol 19: 916-924

Released	2011-06-22
Method	X-RAY DIFFRACTION 1.928 Å
Organisms	Homo sapiens
Macromolecule	PHD finger protein 20 (protein)

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5TBN \| pdb_00005tbn	Download File View File

Solution NMR structure of PHF20 PHD domain in complex with a histone H3K4me2 peptide

Cui, G., Botuyan, M.V., Mer, G.

(2016) Cell Rep 17: 1158-1170

Released	2016-10-12
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Histone H3.1 (protein) PHD finger protein 20 (protein)
Unique Ligands	ZN

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5UMR \| pdb_00005umr	Download File View File

Crystal structure of N-terminal domain of human FACT complex subunit SSRP1

Su, D., Hu, Q., Thompson, J.R., Heroux, A., Botuyan, M.V., Mer, G.

To be published

Released	2018-01-31
Method	X-RAY DIFFRACTION 1.501 Å
Organisms	Homo sapiens
Macromolecule	FACT complex subunit SSRP1 (protein)

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5UMS \| pdb_00005ums	Download File View File

Crystal structure of middle double PH domain of human FACT complex subunit SSRP1

Su, D., Hu, Q., Thompson, J.R., Botuyan, M.V., Mer, G.

To be published

Released	2018-01-31
Method	X-RAY DIFFRACTION 1.569 Å
Organisms	Homo sapiens
Macromolecule	FACT complex subunit SSRP1 (protein)

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5UMT \| pdb_00005umt	Download File View File

Crystal structure of N-terminal domain of human FACT complex subunit SPT16

Su, D., Hu, Q., Thompson, J.R., Botuyan, M.V., Mer, G.

To be published

Released	2018-01-31
Method	X-RAY DIFFRACTION 2.092 Å
Organisms	Homo sapiens
Macromolecule	FACT complex subunit SPT16 (protein)
Unique Ligands	EDO, GOL

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5UMU \| pdb_00005umu	Download File View File

Crystal structure of the middle double PH domain of human FACT complex subunit SPT16

Hu, Q., Thompson, J.R., Heroux, A., Su, D., Botuyan, M.V., Mer, G.

To be published

Released	2018-01-31
Method	X-RAY DIFFRACTION 1.903 Å
Organisms	Homo sapiens
Macromolecule	FACT complex subunit SPT16 (protein)
Unique Ligands	ACT, FMT

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5UMV \| pdb_00005umv	Download File View File

Crystal structure of the BRCT domain of S. cerevisiae Rev1

Lee, J., Xu, C., Thompson, J.R., Botuyan, M.V., Mer, G.

To be published

Released	2018-01-31
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	DNA repair protein REV1 (protein)

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5VEY \| pdb_00005vey	Download File View File

Solution NMR structure of histone H2A-H2B mono-ubiquitylated at H2A Lys15 in complex with RNF169 (653-708)

Hu, Q., Botuyan, M.V., Cui, G., Mer, G.

(2017) Mol Cell 66: 473-487.e9

Released	2017-05-17
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase RNF169 (protein) Histone H2B type 1-J,Histone H2A type 1-B/E (protein) Polyubiquitin-B (protein)

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5VF0 \| pdb_00005vf0	Download File View File

Solution NMR structure of human RAD18 (198-240) in complex with ubiquitin

Hu, Q., Botuyan, M.V., Mer, G.

(2017) Mol Cell 66: 473-487.e9

Released	2017-05-17
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase RAD18 (protein) Polyubiquitin-B (protein)
Unique Ligands	ZN

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5VWE \| pdb_00005vwe	Download File View File

Solution NMR structure of the HMG domain of human FACT complex subunit SSRP1

Hu, Q., Botuyan, M.V., Mer, G.

To be published

Released	2018-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	FACT complex subunit SSRP1 (protein)

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5VX7 \| pdb_00005vx7	Download File View File

Solution NMR structure of the BRCT domain of S. cerevisiae Rev1

Xu, C., Cui, G., Botuyan, M.V., Mer, G.

To be published

Released	2018-01-31
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	DNA repair protein REV1 (protein)

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5VZM \| pdb_00005vzm	Download File View File

Solution NMR structure of human Rev1 (932-1039) in complex with ubiquitin

Cui, G., Botuyan, M.V., Mer, G.

(2018) J Mol Biology 430: 2042-2050

Released	2018-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	DNA repair protein REV1 (protein) Ubiquitin (protein)

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6CO1 \| pdb_00006co1	Download File View File

Structure of human TIRR in complex with 53BP1 Tudor domains

Cui, G., Botuyan, M.V., Mer, G.

(2018) Nat Struct Mol Biol 25: 591-600

Released	2018-06-06
Method	X-RAY DIFFRACTION 2.179 Å
Organisms	Homo sapiens
Macromolecule	TP53-binding protein 1 (protein) Tudor-interacting repair regulator protein (protein)

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6CO2 \| pdb_00006co2	Download File View File

Structure of an engineered protein (NUDT16TI) in complex with 53BP1 Tudor domains

Botuyan, M.V., Thompson, J.R., Cui, G., Mer, G.

(2018) Nat Struct Mol Biol 25: 591-600

Released	2018-06-06
Method	X-RAY DIFFRACTION 2.49 Å
Organisms	Homo sapiens
Macromolecule	NUDT16-Tudor-interacting (NUDT16TI) (protein) TP53-binding protein 1 (protein)