DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 6QPH designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6QPH_DGD_B_5002 | 14% | 48% | 0.141 | 0.836 | 0.93 | 0.99 | 2 | 3 | 5 | 0 | 58% | 1 |
| 6QPH_DGD_2_811 | 8% | 45% | 0.155 | 0.765 | 0.97 | 1.07 | 3 | 4 | 4 | 0 | 71% | 1 |
| 6QPH_DGD_J_5001 | 1% | 64% | 0.122 | 0.499 | 0.62 | 0.59 | - | - | 0 | 0 | 42% | 1 |
| 6QPH_DGD_4_811 | 1% | 48% | 0.186 | 0.487 | 0.91 | 0.99 | 3 | 3 | 9 | 0 | 68% | 1 |
| 7M76_DGD_L_207 | 93% | 41% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 7M78_DGD_L_207 | 77% | 38% | 0.082 | 0.97 | 0.93 | 1.4 | 2 | 14 | 4 | 0 | 100% | 1 |
| 5OY0_DGD_L_5004 | 4% | 41% | 0.18 | 0.662 | 1.19 | 1.02 | 7 | 2 | 7 | 0 | 100% | 1 |
| 7M75_DGD_L_206 | 2% | 39% | 0.21 | 0.618 | 0.99 | 1.29 | 4 | 8 | 4 | 0 | 100% | 1 |
| 5V2C_DGD_C_516 | 91% | 41% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 86% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 85% | 48% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 1PPR_DGD_O_625 | 82% | 51% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
| 8IRF_DGD_C_517 | 81% | 45% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
