Ligand validation:6QPH

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 6QPH designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
6QPH_CLA_B_1235	46%	19%	0.121	0.907	1.42	1.98	10	18	14	0	92%	1
6QPH_CLA_B_1222	44%	14%	0.121	0.936	1.61	2.17	9	16	7	0	75%	1
6QPH_CLA_A_1138	41%	21%	0.146	0.909	1.37	1.9	7	16	14	0	100%	1
6QPH_CLA_B_1210	38%	16%	0.124	0.916	1.51	2.12	7	15	7	0	75%	1
6QPH_CLA_B_1217	36%	16%	0.098	0.873	1.6	2.01	7	15	4	0	71%	1
6QPH_CLA_B_1231	36%	19%	0.16	0.926	1.43	1.96	5	19	12	0	92%	1
6QPH_CLA_4_608	34%	16%	0.111	0.882	1.57	2.04	7	14	6	0	71%	1
6QPH_CLA_A_1013	34%	21%	0.168	0.909	1.39	1.89	9	18	36	0	100%	1
6QPH_CLA_4_603	33%	15%	0.137	0.909	1.59	2.08	8	16	3	0	75%	1
6QPH_CLA_A_1105	32%	15%	0.124	0.881	1.56	2.14	9	16	2	0	75%	1
6QPH_CLA_1_606	31%	15%	0.118	0.885	1.6	2.11	7	16	23	0	69%	1
6QPH_CLA_4_602	31%	16%	0.114	0.859	1.54	2.09	6	16	8	0	75%	1
6QPH_CLA_1_611	30%	15%	0.126	0.878	1.58	2.12	7	18	9	0	75%	1
6QPH_CLA_1_608	30%	15%	0.12	0.877	1.59	2.12	7	15	14	0	71%	1
6QPH_CLA_1_613	30%	16%	0.113	0.866	1.57	2.05	8	16	26	0	69%	1
6QPH_CLA_B_1204	29%	15%	0.14	0.897	1.57	2.1	7	17	7	0	75%	1
6QPH_CLA_1_604	29%	15%	0.148	0.909	1.56	2.16	7	20	21	0	75%	1
6QPH_CLA_3_605	28%	17%	0.157	0.926	1.58	1.96	9	14	14	0	71%	1
6QPH_CLA_A_1110	26%	15%	0.145	0.888	1.52	2.16	7	18	23	0	75%	1
6QPH_CLA_A_1103	26%	17%	0.175	0.916	1.47	2.01	7	18	8	0	85%	1
6QPH_CLA_1_612	26%	18%	0.149	0.853	1.45	1.98	7	16	3	1	92%	1
6QPH_CLA_3_615	26%	15%	0.153	0.908	1.63	2.04	7	15	0	0	71%	1
6QPH_CLA_B_1227	25%	14%	0.13	0.87	1.7	2.11	8	15	7	0	69%	1
6QPH_CLA_B_1021	25%	20%	0.19	0.898	1.4	1.93	8	18	23	0	100%	1
6QPH_CLA_B_1229	25%	19%	0.156	0.839	1.48	1.91	9	19	9	0	100%	1
6QPH_CLA_B_1202	24%	15%	0.171	0.921	1.55	2.15	6	17	5	0	75%	1
6QPH_CLA_B_1228	24%	20%	0.16	0.862	1.39	1.94	7	18	9	0	92%	1
6QPH_CLA_A_1107	24%	15%	0.165	0.91	1.57	2.12	6	16	8	0	75%	1
6QPH_CLA_4_605	24%	14%	0.142	0.87	1.62	2.15	8	15	11	0	75%	1
6QPH_CLA_B_1236	24%	15%	0.152	0.886	1.52	2.2	6	19	6	0	75%	1
6QPH_CLA_A_1136	24%	15%	0.122	0.834	1.56	2.12	6	16	12	0	75%	1
6QPH_CLA_1_602	24%	16%	0.13	0.858	1.58	2.05	8	16	2	0	71%	1
6QPH_CLA_J_1302	23%	15%	0.131	0.847	1.57	2.07	6	15	11	0	75%	1
6QPH_CLA_2_603	23%	16%	0.145	0.881	1.59	2	6	14	6	0	71%	1
6QPH_CLA_A_1012	23%	18%	0.193	0.91	1.49	1.95	9	19	25	0	92%	1
6QPH_CLA_4_601	22%	15%	0.124	0.829	1.53	2.12	8	20	15	0	75%	1
6QPH_CLA_A_1109	22%	15%	0.127	0.832	1.54	2.16	8	17	16	0	75%	1
6QPH_CLA_A_1118	22%	15%	0.157	0.882	1.52	2.14	8	16	3	0	75%	1
6QPH_CLA_2_607	22%	14%	0.14	0.852	1.58	2.16	6	17	12	0	75%	1
6QPH_CLA_A_1127	22%	14%	0.182	0.923	1.6	2.18	8	18	12	0	75%	1
6QPH_CLA_A_1135	22%	15%	0.155	0.877	1.54	2.15	8	16	3	0	75%	1
6QPH_CLA_B_1209	21%	15%	0.128	0.84	1.61	2.04	7	16	4	0	71%	1
6QPH_CLA_B_1237	21%	15%	0.125	0.823	1.56	2.12	7	17	2	0	75%	1
6QPH_CLA_2_601	21%	17%	0.141	0.849	1.5	2.03	7	17	17	0	75%	1
6QPH_CLA_A_1132	21%	15%	0.117	0.807	1.54	2.16	8	17	3	0	75%	1
6QPH_CLA_B_1216	21%	15%	0.15	0.861	1.53	2.12	8	18	10	0	75%	1
6QPH_CLA_A_1104	20%	18%	0.195	0.895	1.38	2.06	7	19	7	0	92%	1
6QPH_CLA_2_604	20%	15%	0.126	0.818	1.55	2.12	7	18	7	0	75%	1
6QPH_CLA_2_612	20%	14%	0.162	0.875	1.6	2.13	7	16	11	0	75%	1
6QPH_CLA_4_606	19%	15%	0.131	0.821	1.57	2.11	8	16	7	0	75%	1
6QPH_CLA_B_1213	19%	16%	0.166	0.88	1.47	2.09	7	19	2	0	75%	1
6QPH_CLA_B_1212	19%	15%	0.163	0.888	1.61	2.03	6	16	12	0	69%	1
6QPH_CLA_A_1106	19%	20%	0.209	0.891	1.36	1.93	7	17	9	0	100%	1
6QPH_CLA_A_1119	18%	15%	0.151	0.846	1.57	2.13	6	17	3	0	75%	1
6QPH_CLA_B_1220	18%	17%	0.161	0.84	1.49	2.02	6	19	8	0	85%	1
6QPH_CLA_F_1301	18%	14%	0.164	0.874	1.64	2.15	5	17	5	0	72%	1
6QPH_CLA_B_1234	18%	15%	0.159	0.857	1.56	2.13	9	18	8	0	75%	1
6QPH_CLA_A_1122	18%	15%	0.154	0.848	1.54	2.12	7	17	3	0	75%	1
6QPH_CLA_A_1139	18%	15%	0.183	0.886	1.55	2.1	7	20	12	0	80%	1
6QPH_CLA_B_1206	18%	15%	0.155	0.849	1.56	2.13	8	17	4	0	75%	1
6QPH_CLA_B_1223	17%	14%	0.181	0.885	1.63	2.2	7	18	5	0	77%	1
6QPH_CLA_A_1112	17%	15%	0.157	0.847	1.56	2.13	7	18	1	0	75%	1
6QPH_CLA_A_1115	16%	14%	0.138	0.805	1.58	2.18	7	17	11	0	75%	1
6QPH_CLA_A_1137	16%	15%	0.159	0.839	1.54	2.16	7	19	8	0	75%	1
6QPH_CLA_4_609	16%	14%	0.174	0.864	1.55	2.19	6	17	11	0	75%	1
6QPH_CLA_B_1221	15%	14%	0.165	0.848	1.58	2.2	7	19	5	0	75%	1
6QPH_CLA_B_1214	15%	15%	0.204	0.912	1.57	2.11	10	19	9	0	75%	1
6QPH_CLA_B_1023	15%	20%	0.191	0.85	1.46	1.88	8	18	27	0	92%	1
6QPH_CLA_1_601	15%	16%	0.138	0.8	1.51	2.07	9	17	12	0	75%	1
6QPH_CLA_4_612	15%	14%	0.155	0.826	1.6	2.15	8	19	10	0	75%	1
6QPH_CLA_A_1117	15%	15%	0.195	0.891	1.56	2.16	8	17	5	0	75%	1
6QPH_CLA_4_604	14%	14%	0.165	0.84	1.59	2.16	7	17	17	0	75%	1
6QPH_CLA_A_1133	14%	15%	0.177	0.86	1.57	2.09	7	16	4	0	75%	1
6QPH_CLA_A_1130	14%	16%	0.137	0.769	1.49	2.07	7	18	4	0	85%	1
6QPH_CLA_1_605	14%	16%	0.151	0.818	1.53	2.1	5	17	14	0	74%	1
6QPH_CLA_F_1302	14%	16%	0.149	0.81	1.53	2.05	10	17	2	0	75%	1
6QPH_CLA_A_1140	14%	18%	0.196	0.867	1.47	2	11	15	8	0	85%	1
6QPH_CLA_A_1134	14%	15%	0.152	0.812	1.54	2.16	7	18	3	0	75%	1
6QPH_CLA_B_1240	14%	21%	0.184	0.807	1.39	1.88	7	18	4	0	100%	1
6QPH_CLA_1_603	13%	14%	0.155	0.827	1.74	2.04	8	16	12	0	69%	1
6QPH_CLA_B_1226	13%	15%	0.173	0.839	1.53	2.19	8	18	12	0	75%	1
6QPH_CLA_B_1219	13%	16%	0.134	0.771	1.52	2.1	8	17	5	0	75%	1
6QPH_CLA_A_1113	13%	15%	0.156	0.821	1.61	2.03	8	15	7	0	69%	1
6QPH_CLA_B_1232	12%	15%	0.176	0.838	1.56	2.14	7	16	3	0	75%	1
6QPH_CLA_B_1208	12%	15%	0.137	0.771	1.57	2.13	6	18	0	0	75%	1
6QPH_CLA_B_1239	12%	21%	0.189	0.8	1.38	1.9	8	17	15	0	100%	1
6QPH_CLA_3_601	11%	14%	0.15	0.783	1.6	2.23	6	17	17	0	75%	1
6QPH_CLA_3_610	11%	16%	0.182	0.831	1.53	2.05	7	17	4	0	75%	1
6QPH_CLA_A_1129	10%	15%	0.177	0.823	1.57	2.07	7	18	4	0	74%	1
6QPH_CLA_B_1022	10%	15%	0.202	0.857	1.5	2.15	8	20	7	0	77%	1
6QPH_CLA_A_1124	10%	15%	0.165	0.797	1.54	2.15	7	18	15	0	75%	1
6QPH_CLA_A_1123	10%	15%	0.198	0.856	1.6	2.08	7	17	9	0	74%	1
6QPH_CLA_3_613	10%	15%	0.163	0.804	1.6	2.04	6	14	14	0	71%	1
6QPH_CLA_2_605	10%	19%	0.182	0.767	1.4	1.96	7	20	8	0	100%	1
6QPH_CLA_2_606	10%	14%	0.16	0.797	1.65	2.11	8	16	4	0	71%	1
6QPH_CLA_3_606	10%	15%	0.144	0.773	1.61	2.07	6	16	21	0	69%	1
6QPH_CLA_A_1102	10%	15%	0.193	0.852	1.61	2.08	8	15	9	0	69%	1
6QPH_CLA_2_615	10%	16%	0.178	0.808	1.51	2.1	8	17	1	0	77%	1
6QPH_CLA_2_608	9%	14%	0.167	0.789	1.55	2.19	7	18	3	0	75%	1
6QPH_CLA_B_1225	9%	15%	0.23	0.895	1.53	2.14	7	18	9	0	75%	1
6QPH_CLA_1_607	9%	15%	0.174	0.808	1.58	2.06	7	15	4	0	71%	1
6QPH_CLA_A_1125	9%	15%	0.219	0.873	1.53	2.12	6	17	13	0	75%	1
6QPH_CLA_B_1230	9%	14%	0.168	0.783	1.56	2.2	8	15	15	0	75%	1
6QPH_CLA_4_607	8%	16%	0.164	0.759	1.56	2.07	8	18	6	0	75%	1
6QPH_CLA_B_1201	8%	15%	0.145	0.726	1.6	2.07	8	16	2	0	75%	1
6QPH_CLA_A_1128	7%	14%	0.226	0.86	1.59	2.16	8	17	14	0	75%	1
6QPH_CLA_A_1116	7%	15%	0.205	0.82	1.53	2.14	7	16	6	0	75%	1
6QPH_CLA_3_612	7%	17%	0.22	0.818	1.44	2.04	8	19	11	0	85%	1
6QPH_CLA_B_1238	7%	15%	0.147	0.711	1.54	2.11	6	17	1	0	77%	1
6QPH_CLA_B_1211	7%	15%	0.181	0.771	1.55	2.12	8	15	8	0	75%	1
6QPH_CLA_A_1111	6%	15%	0.181	0.762	1.49	2.2	6	20	25	0	75%	1
6QPH_CLA_A_1101	6%	14%	0.201	0.808	1.66	2.12	7	17	7	0	69%	1
6QPH_CLA_4_615	6%	17%	0.205	0.775	1.45	2.03	5	18	10	0	85%	1
6QPH_CLA_A_1126	6%	14%	0.234	0.843	1.61	2.19	5	15	6	0	75%	1
6QPH_CLA_3_611	6%	16%	0.184	0.767	1.59	2.04	7	14	11	0	71%	1
6QPH_CLA_3_603	5%	13%	0.124	0.651	1.63	2.31	8	20	33	0	69%	1
6QPH_CLA_B_1203	4%	15%	0.204	0.764	1.55	2.14	6	15	2	0	75%	1
6QPH_CLA_B_1205	4%	15%	0.224	0.797	1.54	2.17	8	16	5	0	75%	1
6QPH_CLA_A_1108	4%	15%	0.207	0.775	1.64	2.09	7	17	10	0	71%	1
6QPH_CLA_1_615	4%	20%	0.19	0.657	1.38	1.91	8	16	7	0	100%	1
6QPH_CLA_2_602	3%	14%	0.177	0.686	1.57	2.17	7	17	7	0	75%	1
6QPH_CLA_A_1141	3%	15%	0.115	0.574	1.54	2.13	6	18	5	0	77%	1
6QPH_CLA_B_1215	3%	13%	0.251	0.802	1.63	2.29	6	17	4	0	75%	1
6QPH_CLA_B_1224	3%	16%	0.237	0.758	1.52	2.1	7	17	4	0	75%	1
6QPH_CLA_B_1207	2%	4%	0.133	0.664	3.28	2.44	12	13	0	0	38%	1
6QPH_CLA_B_1218	2%	15%	0.16	0.593	1.55	2.13	8	17	5	0	75%	1
6QPH_CLA_A_1114	2%	16%	0.203	0.667	1.58	2.05	9	14	7	0	71%	1
6QPH_CLA_A_1131	2%	15%	0.166	0.578	1.55	2.11	7	17	4	0	77%	1
6QPH_CLA_A_1120	1%	15%	0.172	0.565	1.55	2.14	7	18	0	0	75%	1
6QPH_CLA_3_608	1%	16%	0.125	0.41	1.56	2.04	8	16	8	0	74%	1
6QPH_CLA_A_1121	0%	15%	0.134	0.308	1.55	2.12	7	16	5	0	75%	1
6QPH_CLA_3_607	0%	16%	0.221	0.366	1.53	2.1	7	18	2	0	77%	1
8H2U_CLA_B_805	60%	20%	0.078	0.959	2.02	1.32	7	8	1	0	68%	1
7M76_CLA_B_3041	100%	33%	0.015	0.999	1.25	1.37	7	8	4	0	100%	1
8OW6_CLA_B_601	100%	39%	0.016	0.998	1.28	1.04	12	5	0	0	100%	1
6PGK_CLA_G_842	100%	9%	0.024	0.997	2.21	2.22	21	25	9	0	100%	1
1VF5_CLA_B_201	97%	14%	0.039	0.993	1.61	2.22	9	17	9	2	100%	1
5V2C_CLA_d_403	97%	15%	0.034	0.984	1.7	2.01	14	23	4	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6QPH | pdb_00006qph

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 6QPH designated by the RCSB