PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5Z0Q designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5Z0Q_PLP_A_401 | 72% | 40% | 0.131 | 0.956 | 1.12 | 1.2 | 2 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_J_401 | 69% | 46% | 0.136 | 0.951 | 1.06 | 1.02 | 1 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_F_401 | 67% | 45% | 0.14 | 0.948 | 1.04 | 1.1 | 1 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_D_401 | 63% | 42% | 0.155 | 0.952 | 1.09 | 1.14 | 1 | 2 | 1 | 0 | 100% | 0.9375 |
5Z0Q_PLP_B_401 | 62% | 45% | 0.146 | 0.939 | 1.08 | 1.06 | 2 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_H_401 | 57% | 45% | 0.16 | 0.937 | 1.07 | 1.05 | 2 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_E_401 | 49% | 45% | 0.168 | 0.915 | 1.06 | 1.05 | 1 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_K_401 | 49% | 42% | 0.187 | 0.933 | 1.03 | 1.21 | 1 | 3 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_C_401 | 46% | 46% | 0.192 | 0.927 | 1.06 | 1.04 | 1 | 2 | 1 | 0 | 100% | 0.9375 |
5Z0Q_PLP_L_401 | 45% | 46% | 0.179 | 0.91 | 1.04 | 1.03 | 1 | 2 | 1 | 0 | 100% | 0.9375 |
5Z0Q_PLP_I_401 | 35% | 46% | 0.187 | 0.876 | 1.05 | 1.02 | 1 | 2 | 0 | 0 | 100% | 0.9375 |
5Z0Q_PLP_G_401 | 34% | 43% | 0.207 | 0.893 | 1.08 | 1.11 | 1 | 2 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |