5Z0Q | pdb_00005z0q

Crystal Structure of OvoB

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
L	d5z0ql_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
K	d5z0qk_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
J	d5z0qj_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
I	d5z0qi_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
H	d5z0qh_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
G	d5z0qg_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
F	d5z0qf_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
E	d5z0qe_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
D	d5z0qd_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
C [auth B]	d5z0qb_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
B [auth A]	d5z0qa_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)
A [auth C]	d5z0qc_	Alpha and beta proteins (a/b)	PLP-dependent transferase-like	PLP-dependent transferases	automated matches	automated matches	(Erwinia tasmaniensis Et1/99 ) [TaxId: 465817 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Tyrosinase	e5z0qL1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
K	Tyrosinase	e5z0qK1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
J	Tyrosinase	e5z0qJ1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
I	Tyrosinase	e5z0qI1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
H	Tyrosinase	e5z0qH1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
G	Tyrosinase	e5z0qG1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
F	Tyrosinase	e5z0qF1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
E	Tyrosinase	e5z0qE1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
D	Tyrosinase	e5z0qD1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
C [auth B]	Tyrosinase	e5z0qB1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
B [auth A]	Tyrosinase	e5z0qA1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
A [auth C]	TGF_beta	e5z0qC1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: TGF_beta	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
L	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
K	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
K	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
J	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
J	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
I	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
I	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
H	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
H	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
G	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
G	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
F	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
F	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
E	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
E	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
D	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
D	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
C [auth B]	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
C [auth B]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
B [auth A]	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
B [auth A]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)
A [auth C]	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
A [auth C]	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	PF00155	Aminotransferase class I and II (Aminotran_1_2)	Aminotransferase class I and II		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	Aminotransferase, class I and II	transferase activity, transferring nitrogenous groups transaminase activity transferase activity catalytic activity carbon-sulfur lyase activity lyase activity cysteine-S-conjugate beta-lyase activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding anion binding heterocyclic compound binding transferase activity, transferring nitrogenous groups transaminase activity transferase activity catalytic activity carbon-sulfur lyase activity lyase activity cysteine-S-conjugate beta-lyase activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding binding anion binding heterocyclic compound binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	IPR051798	Class-II Pyridoxal-Phosphate-Dependent Aminotransferase	Family
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	IPR004839	Aminotransferase, class I/classII, large domain	Domain
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F, G, H, I, J, K, L	IPR027619	C-S lyase, PatB-like	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.