Ligand validation:5NRD

GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE

GDU is a Ligand Of Interest in 5NRD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5NRD_GDU_B_402	39%	88%	0.181	0.889	0.28	0.39	-	-	0	0	100%	0.74
5NRD_GDU_A_403	18%	71%	0.225	0.809	0.33	0.78	-	2	2	0	100%	0.74
5NRB_GDU_B_402	18%	89%	0.233	0.822	0.26	0.39	-	-	0	0	100%	0.59
3UKF_GDU_H_802	100%	14%	0.043	0.992	1.94	1.89	12	10	3	0	100%	1
4HO9_GDU_B_300	99%	24%	0.05	0.983	1.38	1.71	4	9	0	0	100%	1
6GX0_GDU_A_402	97%	47%	0.067	0.98	0.81	1.22	1	6	0	0	100%	0.6
5M7D_GDU_A_402	97%	44%	0.071	0.983	0.91	1.26	1	6	0	0	100%	1
7YS9_GDU_A_404	91%	78%	0.087	0.974	0.39	0.51	-	1	1	0	100%	0.4

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.