5LGD


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5LGD designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5LGD_NAG_A_504Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5LGD_NAG_A_504Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5LGD_NAG_A_504 79% 73% 0.097 0.9430.3 0.74 - -10100%1
5LGD_NAG_A_507 69% 75% 0.14 0.9560.28 0.69 - -00100%1
5LGD_NAG_A_506 63% 73% 0.122 0.9160.33 0.72 - -00100%1
5LGD_NAG_A_505 43% 58% 0.154 0.8760.32 1.26 - 100100%1
5LGD_NAG_A_508 42% 69% 0.165 0.8830.27 0.92 - 100100%1
5LGD_NAG_A_511 17% 76% 0.215 0.7920.34 0.59 - -00100%1
5LGD_NAG_A_510 6% 71% 0.353 0.780.32 0.78 - 100100%1
5LGD_NAG_A_509 2% 62% 0.365 0.6710.31 1.14 - 100100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1