Ligand validation:5HKV

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5HKV_MPD_X_3015	54%	76%	0.119	0.925	0.49	0.37	-	-	2	0	100%	1
5HKV_MPD_X_3005	52%	59%	0.154	0.973	0.83	0.59	-	-	1	0	100%	1
5HKV_MPD_X_3002	27%	82%	0.216	0.953	0.46	0.29	-	-	1	0	100%	1
5HKV_MPD_X_3003	26%	62%	0.166	0.864	0.75	0.54	-	-	2	0	100%	1
5HKV_MPD_X_3011	20%	75%	0.152	0.805	0.48	0.4	-	-	0	0	100%	1
5HKV_MPD_X_3020	20%	71%	0.232	0.94	0.62	0.37	-	-	2	0	100%	1
5HKV_MPD_X_3021	19%	59%	0.227	0.922	0.86	0.56	-	-	0	0	100%	1
5HKV_MPD_X_3010	16%	78%	0.238	0.92	0.47	0.35	-	-	0	0	100%	1
5HKV_MPD_X_3009	16%	76%	0.227	0.898	0.6	0.26	-	-	0	0	100%	1
5HKV_MPD_X_3006	14%	72%	0.237	0.895	0.54	0.41	-	-	2	0	100%	1
5HKV_MPD_X_3008	11%	67%	0.259	0.91	0.66	0.44	-	-	2	0	100%	1
5HKV_MPD_X_3007	10%	65%	0.301	0.961	0.62	0.54	-	-	1	0	100%	1
5HKV_MPD_X_3022	8%	55%	0.284	0.905	1.05	0.51	1	-	0	0	100%	1
5HKV_MPD_S_301	8%	70%	0.225	0.805	0.7	0.3	-	-	0	0	100%	1
5HKV_MPD_X_3018	5%	61%	0.344	0.948	0.86	0.46	-	-	0	0	100%	1
5HKV_MPD_X_3014	5%	64%	0.112	0.554	0.77	0.44	-	-	2	0	100%	1
5HKV_MPD_X_3024	3%	67%	0.362	0.936	0.85	0.25	-	-	0	0	100%	1
5HKV_MPD_X_3016	2%	82%	0.361	0.877	0.6	0.17	-	-	0	0	100%	1
5HKV_MPD_X_3023	2%	57%	0.368	0.865	0.83	0.66	-	-	1	0	100%	1
5HKV_MPD_X_3004	1%	79%	0.393	0.895	0.64	0.18	-	-	1	0	100%	1
5HKV_MPD_X_3013	1%	65%	0.392	0.867	0.72	0.45	-	-	2	0	100%	1
5HKV_MPD_X_3019	1%	53%	0.44	0.937	1.18	0.48	1	-	0	0	100%	1
5HKV_MPD_X_3017	1%	67%	0.188	0.509	0.69	0.42	-	-	1	0	100%	1
5HKV_MPD_X_3012	0%	93%	0.475	0.793	0.34	0.13	-	-	2	0	100%	1
3SGR_MPD_E_26	99%	71%	0.025	0.994	0.38	0.57	-	-	0	0	100%	1
4X91_MPD_C_410	99%	80%	0.027	0.996	0.24	0.54	-	-	1	0	100%	1
4WCW_MPD_D_203	99%	70%	0.026	0.993	0.3	0.69	-	-	4	0	100%	1
2EIW_MPD_B_1530	99%	61%	0.029	0.995	0.37	0.91	-	-	0	0	100%	1
7ZOB_MPD_F_202	99%	68%	0.029	0.995	0.45	0.61	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.