Ligand validation:5HKV

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5HKV_MPD_X_3011	72%	78%	0.123	0.947	0.55	0.36	-	-	0	0	100%	1
5HKV_MPD_X_3010	71%	80%	0.139	0.959	0.53	0.31	-	-	0	0	100%	1
5HKV_MPD_X_3004	64%	78%	0.154	0.952	0.72	0.19	-	-	1	0	100%	1
5HKV_MPD_X_3014	42%	66%	0.181	0.902	0.87	0.44	1	-	2	0	100%	1
5HKV_MPD_X_3006	42%	75%	0.223	0.945	0.62	0.37	-	-	0	0	100%	1
5HKV_MPD_X_3020	33%	73%	0.217	0.895	0.71	0.33	-	-	2	0	100%	1
5HKV_MPD_X_3003	30%	65%	0.247	0.91	0.85	0.49	-	-	2	0	100%	1
5HKV_MPD_X_3008	29%	70%	0.292	0.952	0.73	0.42	-	-	2	0	100%	1
5HKV_MPD_X_3005	20%	62%	0.365	0.971	0.92	0.54	1	-	1	0	100%	1
5HKV_MPD_X_3023	13%	61%	0.296	0.843	0.92	0.6	1	-	1	0	100%	1
5HKV_MPD_X_3017	13%	71%	0.314	0.853	0.78	0.36	-	-	1	0	100%	1
5HKV_MPD_X_3015	11%	79%	0.381	0.906	0.54	0.33	-	-	2	0	100%	1
5HKV_MPD_X_3012	11%	92%	0.368	0.891	0.4	0.15	-	-	0	0	100%	1
5HKV_MPD_X_3018	11%	64%	0.367	0.89	0.97	0.43	1	-	0	0	100%	1
5HKV_MPD_X_3019	10%	56%	0.343	0.847	1.3	0.44	1	-	0	0	100%	1
5HKV_MPD_X_3002	9%	83%	0.442	0.938	0.53	0.26	-	-	1	0	100%	1
5HKV_MPD_S_301	8%	73%	0.299	0.774	0.77	0.3	-	-	0	0	100%	1
5HKV_MPD_X_3013	7%	68%	0.449	0.918	0.81	0.44	-	-	2	0	100%	1
5HKV_MPD_X_3022	6%	58%	0.391	0.818	1.16	0.48	1	-	0	0	100%	1
5HKV_MPD_X_3009	3%	79%	0.555	0.881	0.67	0.22	-	-	0	0	100%	1
5HKV_MPD_X_3021	2%	62%	0.561	0.852	0.95	0.52	1	-	0	0	100%	1
5HKV_MPD_X_3016	2%	81%	0.578	0.855	0.68	0.16	-	-	0	0	100%	1
5HKV_MPD_X_3007	2%	69%	0.613	0.875	0.69	0.5	-	-	1	0	100%	1
5HKV_MPD_X_3024	2%	70%	0.428	0.671	0.94	0.23	1	-	0	0	100%	1
4QSR_MPD_A_1204	96%	63%	0.078	0.99	0.55	0.84	-	-	0	0	100%	1
3BUI_MPD_A_1048	95%	60%	0.069	0.974	0.57	0.95	-	-	0	1	100%	1
4WPG_MPD_A_301	95%	47%	0.056	0.958	0.43	1.57	-	3	1	0	100%	1
6JOW_MPD_B_901	93%	71%	0.066	0.962	0.34	0.77	-	-	3	0	100%	1
8PO9_MPD_D_910	93%	86%	0.081	0.976	0.3	0.42	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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5HKV

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL