AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
AGS is a Ligand Of Interest in 5DNY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5DNY_AGS_B_1101 | 15% | 52% | 0.257 | 0.814 | 0.75 | 1.09 | 1 | 2 | 4 | 0 | 100% | 1 |
| 5DNY_AGS_D_1101 | 4% | 51% | 0.35 | 0.731 | 0.77 | 1.12 | 1 | 2 | 2 | 0 | 100% | 1 |
| 3AV0_AGS_B_1006 | 57% | 3% | 0.201 | 0.978 | 4.41 | 1.66 | 15 | 6 | 3 | 0 | 100% | 1 |
| 6QV1_AGS_B_600 | 100% | 67% | 0.042 | 0.995 | 0.58 | 0.7 | - | 1 | 0 | 0 | 100% | 1 |
| 8ROK_AGS_A_2001 | 98% | 4% | 0.057 | 0.979 | 4.45 | 1.4 | 9 | 3 | 1 | 0 | 100% | 1 |
| 5DA9_AGS_A_1402 | 98% | 58% | 0.051 | 0.971 | 0.67 | 0.92 | - | 1 | 4 | 0 | 100% | 1 |
| 4TLC_AGS_F_303 | 97% | 58% | 0.069 | 0.983 | 0.68 | 0.93 | - | 2 | 1 | 0 | 100% | 1 |
| 4TLB_AGS_C_303 | 97% | 53% | 0.076 | 0.99 | 0.77 | 1.04 | - | 2 | 0 | 0 | 100% | 1 |
