SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4TNJ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4TNJ_SQD_A_414 | 39% | 36% | 0.148 | 0.902 | 0.96 | 1.5 | 2 | 8 | 4 | 0 | 100% | 1 |
| 4TNJ_SQD_f_103 | 38% | 33% | 0.138 | 0.918 | 1.04 | 1.56 | 3 | 11 | 2 | 0 | 83% | 1 |
| 4TNJ_SQD_D_403 | 30% | 30% | 0.143 | 0.896 | 1.05 | 1.72 | 3 | 10 | 5 | 0 | 80% | 1 |
| 4TNJ_SQD_a_415 | 25% | 32% | 0.171 | 0.881 | 0.97 | 1.68 | 2 | 9 | 3 | 0 | 94% | 1 |
| 4TNJ_SQD_b_602 | 25% | 30% | 0.154 | 0.866 | 1.02 | 1.74 | 4 | 9 | 2 | 0 | 87% | 1 |
| 4TNJ_SQD_a_401 | 14% | 36% | 0.191 | 0.824 | 0.96 | 1.49 | 3 | 9 | 6 | 0 | 100% | 1 |
| 4TNJ_SQD_F_102 | 14% | 33% | 0.187 | 0.85 | 1.04 | 1.57 | 3 | 10 | 2 | 0 | 83% | 1 |
| 4TNJ_SQD_d_402 | 13% | 30% | 0.167 | 0.818 | 1.05 | 1.73 | 3 | 10 | 5 | 0 | 80% | 1 |
| 4TNJ_SQD_B_626 | 11% | 31% | 0.16 | 0.772 | 1.02 | 1.71 | 4 | 10 | 4 | 0 | 87% | 1 |
| 4TNJ_SQD_A_413 | 10% | 33% | 0.19 | 0.796 | 0.97 | 1.66 | 2 | 9 | 3 | 0 | 94% | 1 |
| 5V2C_SQD_A_612 | 85% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 79% | 30% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 78% | 30% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 74% | 30% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 73% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 71% | 36% | 0.081 | 0.944 | 0.92 | 1.56 | 2 | 13 | 2 | 0 | 100% | 1 |














