SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4TNJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4TNJ_SQD_a_415 | 14% | 31% | 0.286 | 0.852 | 0.97 | 1.74 | 4 | 10 | 0 | 0 | 94% | 0.9444 |
4TNJ_SQD_A_414 | 7% | 35% | 0.403 | 0.852 | 0.96 | 1.57 | 5 | 9 | 0 | 0 | 100% | 1 |
4TNJ_SQD_b_602 | 4% | 29% | 0.382 | 0.795 | 1.02 | 1.79 | 4 | 10 | 0 | 0 | 87% | 0.8704 |
4TNJ_SQD_D_403 | 4% | 29% | 0.414 | 0.818 | 1.04 | 1.78 | 3 | 10 | 0 | 0 | 80% | 0.7963 |
4TNJ_SQD_A_413 | 3% | 32% | 0.368 | 0.73 | 0.97 | 1.72 | 4 | 10 | 0 | 0 | 94% | 0.9444 |
4TNJ_SQD_B_626 | 2% | 30% | 0.464 | 0.788 | 1.02 | 1.77 | 4 | 10 | 0 | 0 | 87% | 0.8704 |
4TNJ_SQD_f_103 | 2% | 32% | 0.519 | 0.841 | 1.04 | 1.63 | 4 | 11 | 0 | 0 | 83% | 0.8333 |
4TNJ_SQD_a_401 | 2% | 36% | 0.582 | 0.837 | 0.96 | 1.56 | 4 | 9 | 0 | 0 | 100% | 1 |
4TNJ_SQD_F_102 | 0% | 32% | 0.687 | 0.787 | 1.04 | 1.64 | 5 | 10 | 0 | 0 | 83% | 0.8333 |
4TNJ_SQD_d_402 | 0% | 29% | 0.831 | 0.753 | 1.05 | 1.79 | 3 | 10 | 0 | 0 | 80% | 0.7963 |
5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
8IRF_SQD_a_410 | 76% | 29% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
8IR8_SQD_a_409 | 75% | 31% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |